RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TRIM22Q8IYM9 498 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 GTF3C2Q8WUA4 911 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 NUCKS1Q9H1E3 243 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 RUBCNLQ9H714 662 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 ADAMTSL1Q8N6G6 1762 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 PAPPA2Q9BXP8 1791 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 ANKRD30AQ9BXX3 1397 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 SCAMP3O14828 347 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 KIF4AO95239 1232 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ABL1P00519 1130 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ITGA6P23229 1130 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 HSD3B2P26439 372 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 TSNAXIP1Q2TAA8 658 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 PLEKHG6Q3KR16 790 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 COX20Q5RI15 118 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 IER5Q5VY09 327 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF280DQ6N043 979 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 FIGNL1Q6PIW4 674 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 CASC1Q6TDU7 716 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 DLK2Q6UY11 383 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 C11orf96Q7Z7L8 435 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 LINC00116Q8NCU8 138 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 IRF2BPLQ9H1B7 796 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF408Q9H9D4 720 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 GABBR1Q9UBS5 961 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 HDAC9Q9UKV0 1011 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 COL4A3BPQ9Y5P4 624 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 YTHDC2Q9H6S0 1430 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 C4BP0C0L5 1744 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 USP47Q96K76 1375 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 IQCA1LA6NCM1 817 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 TGFBR3LH3BV60 316 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 CLGNO14967 610 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 CELF2O95319 508 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 CELA2BP08218 269 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 SCNN1AP37088 669 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 GYS2P54840 703 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 AKAP4Q5JQC9 854 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 CAPN12Q6ZSI9 719 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 PCGF5Q86SE9 256 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 NLGN1Q8N2Q7 840 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF296Q8WUU4 475 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF622Q969S3 477 aaKnown RBP eCLIP4.42□□□□□ -1.71e-7■□□□□ 9.8
ECHDC1-205ENST00000368295 SUSD3Q96L08 255 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 YTHDC1Q96MU7 727 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 PRKAG2Q9UGJ0 569 aa4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 FBXO9Q9UK97 447 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-205ENST00000368295 ANKRD36BQ8N2N9 1353 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 TNFRSF10BO14763 440 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 BDNFP23560 247 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 SERPINB4P48594 390 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 TBX4P57082 545 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 KIF23Q02241 960 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 SRSF11Q05519 484 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF211Q13398 564 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 CNGB1Q14028 1251 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 TCEAL1Q15170 157 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 SAMD5Q5TGI4 173 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 FOXR1Q6PIV2 292 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 LRRC69Q6ZNQ3 347 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 FBXO33Q7Z6M2 555 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 DHX38Q92620 1227 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF837Q96EG3 531 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 HSH2DQ96JZ2 352 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 FAM161BQ96MY7 647 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 RPS6KC1Q96S38 1066 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 SAP130Q9H0E3 1048 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 KLK14Q9P0G3 267 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 STIM2Q9P246 746 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 HACL1Q9UJ83 578 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 DOT1LQ8TEK3 1739 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 UBR3Q6ZT12 1888 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 ANKRD50Q9ULJ7 1429 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 PALLDQ8WX93 1383 aa4.41□□□□□ -1.7
ECHDC1-205ENST00000368295 C4AP0C0L4 1744 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 SCO2A0A1W2PP80 73 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 H3BRB1 525 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 PRC1O43663 620 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF500O60304 480 aaPredicted RBP4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 ICMTO60725 284 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 FAM13AO94988 1023 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 TBC1D8O95759 1140 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 S100BP04271 92 aaPredicted RBP4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 IL2RBP14784 551 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 HDLBPQ00341 1268 aaKnown RBP4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 DDR1Q08345 913 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 FBXO46Q6PJ61 603 aaPredicted RBP4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 SV2AQ7L0J3 742 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 GLYCTKQ8IVS8 523 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 C7orf43Q8WVR3 580 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 IFT43Q96FT9 208 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 TMX1Q9H3N1 280 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 TUT1Q9H6E5 874 aaKnown RBP4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 SPC25Q9HBM1 224 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 PCDH12Q9NPG4 1184 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 LRFN2Q9ULH4 789 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 PHF24Q9UPV7 400 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 NUB1Q9Y5A7 615 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 RGPD5Q99666 1765 aa4.4□□□□□ -1.7
ECHDC1-205ENST00000368295 CDC14CA4D256 554 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms