RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 CUL5Q93034 780 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
PTPRK-206ENST00000368215 CENPHQ9H3R5 247 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ZNF215Q9UL58 517 aaPredicted RBP9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ANKRD26Q9UPS8 1709 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ARID5AQ03989 594 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 MCM6Q14566 821 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 CELF1Q92879 486 aaKnown RBP9.55□□□□□ -0.88
PTPRK-206ENST00000368215 PKNOX2Q96KN3 472 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 LUC7L2Q9Y383 392 aaKnown RBP9.55□□□□□ -0.88
PTPRK-206ENST00000368215 PPP6R2O75170 966 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 PLEKHA8P1O95397 391 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ST3GAL1Q11201 340 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 PAK1Q13153 545 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 DYNLL2Q96FJ2 89 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ERO1AQ96HE7 468 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 SENP2Q9HC62 589 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 EVCP57679 992 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 TCP10Q12799 353 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 SYCP1Q15431 976 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 CCDC144BQ3MJ40 725 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 SPECC1LQ69YQ0 1117 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 LEKR1Q6ZMV7 388 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 EYA3Q99504 573 aa9.55□□□□□ -0.88
PTPRK-206ENST00000368215 ARHGAP23Q9P227 1491 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 PRDX5P30044 214 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CNGA4Q8IV77 575 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 BLIDQ8IZY5 108 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CAPZA3Q96KX2 299 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 LY9Q9HBG7 655 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 SLIT1O75093 1534 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CTAGE9A4FU28 777 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 ARHGAP6O43182 974 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 RHOXF2BP0C7M4 288 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CYP2D6P10635 497 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 MECOMQ03112 1051 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 NELFBQ8WX92 580 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 RHOXF2Q9BQY4 288 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 RNF26Q9BY78 433 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-206ENST00000368215 FOXP1Q9H334 677 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-206ENST00000368215 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CSF1RP07333 972 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 KRT9P35527 623 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CYLC1P35663 651 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-206ENST00000368215 ANTXR2P58335 489 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 FAM196AQ6ZSG2 479 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 TAF4BQ92750 862 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 FEZ1Q99689 392 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 ARFGAP3Q9NP61 516 aa9.54□□□□□ -0.88
PTPRK-206ENST00000368215 CTAGE15A4D2H0 777 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 NMT2O60551 498 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CTAGE8P0CG41 777 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 FDPSP14324 419 aaKnown RBP9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CASP1P29466 404 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CTAGE6Q86UF2 777 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CTAGE4Q8IX94 777 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CSGALNACT2Q8N6G5 542 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 KCNB2Q92953 911 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 TRERF1Q96PN7 1200 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 KLRF2D3W0D1 207 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 GUCY1A2P33402 732 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.881e-7■■■■■ 27.7
PTPRK-206ENST00000368215 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 TXLNBQ8N3L3 684 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 GBP3Q9H0R5 595 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 FRMPD2Q68DX3 1309 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CPDO75976 1380 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 SMCO2A6NFE2 343 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 BTDP43251 543 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 PLCD1P51178 756 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 ERCC6LQ2NKX8 1250 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 UBN2Q6ZU65 1347 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 SCNN1DP51172 638 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 SV2BQ7L1I2 683 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 LRRC47Q8N1G4 583 aaKnown RBP9.53□□□□□ -0.88
PTPRK-206ENST00000368215 CCDC42Q96M95 316 aa9.53□□□□□ -0.88
PTPRK-206ENST00000368215 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
PTPRK-206ENST00000368215 WDHD1O75717 1129 aaPredicted RBP9.52□□□□□ -0.88
PTPRK-206ENST00000368215 SLF1Q9BQI6 1058 aa9.52□□□□□ -0.88
PTPRK-206ENST00000368215 SAMSN1Q9NSI8 373 aaKnown RBP9.52□□□□□ -0.88
PTPRK-206ENST00000368215 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.88
PTPRK-206ENST00000368215 MAN1B1Q9UKM7 699 aa9.52□□□□□ -0.88
PTPRK-206ENST00000368215 PPP1R12BO60237 982 aaPredicted RBP9.52□□□□□ -0.89
PTPRK-206ENST00000368215 KIF20AO95235 890 aa9.52□□□□□ -0.89
PTPRK-206ENST00000368215 PAFAH1B1P43034 410 aa9.52□□□□□ -0.89
PTPRK-206ENST00000368215 CASP7P55210 303 aa9.52□□□□□ -0.89
PTPRK-206ENST00000368215 PPP2R3AQ06190 1150 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms