RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	GLTPD2	A6NH11	291 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	MPHOSPH10	O00566	681 aa	Known RBP	24.67	■■□□□ 1.54
CD55-205	ENST00000367067	JAK2	O60674	1132 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	DDAH1	O94760	285 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	SMARCC2	Q8TAQ2	1214 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	NUP133	Q8WUM0	1156 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	DEFB129	Q9H1M3	183 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	MYH4	Q9Y623	1939 aa		24.67	■■□□□ 1.54
CD55-205	ENST00000367067	SCN4A	P35499	1836 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	IGKV6D-41	A0A0C4DH26	115 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	TBC1D12	O60347	775 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	CALM1	P0DP23	149 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	CALM2	P0DP24	149 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	CALM3	P0DP25	149 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	CDC27	P30260	824 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	TROAP	Q12815	778 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	FANCB	Q8NB91	859 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	TEPSIN	Q96N21	525 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	MTMR4	Q9NYA4	1195 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	GGA3	Q9NZ52	723 aa		24.66	■■□□□ 1.54
CD55-205	ENST00000367067	ADD1	P35611	737 aa	Known RBP	24.65	■■□□□ 1.54
CD55-205	ENST00000367067	NOV	P48745	357 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	NFKBIB	Q15653	356 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	RTN1	Q16799	776 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	FAM217B	Q9NTX9	383 aa	Predicted RBP	24.65	■■□□□ 1.54
CD55-205	ENST00000367067	PTPDC1	A2A3K4	754 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	NUCB2	P80303	420 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	PPP2R5B	Q15173	497 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	PNMA1	Q8ND90	353 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	TMEM47	Q9BQJ4	181 aa		24.65	■■□□□ 1.54
CD55-205	ENST00000367067	CCDC196	A0A1B0GTZ2	297 aa		24.64	■■□□□ 1.54
CD55-205	ENST00000367067	HMGN5	P82970	282 aa	Known RBP	24.64	■■□□□ 1.54
CD55-205	ENST00000367067	CPLX2	Q6PUV4	134 aa	Known RBP	24.64	■■□□□ 1.54
CD55-205	ENST00000367067	MAP3K10	Q02779	954 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	ABCB5	Q2M3G0	1257 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	MIGA2	Q7L4E1	593 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	DDX11	Q96FC9	970 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	CDKL5	O76039	1030 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	TOP1	P11387	765 aa	Known RBP	24.63	■■□□□ 1.53
CD55-205	ENST00000367067	PKP1	Q13835	747 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	PPP4R3B	Q5MIZ7	849 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	TMEM179	Q6ZVK1	233 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	PITPNM2	Q9BZ72	1349 aa		24.63	■■□□□ 1.53
CD55-205	ENST00000367067	GDF11	O95390	407 aa		24.62	■■□□□ 1.53
CD55-205	ENST00000367067	TTLL1	O95922	423 aa		24.62	■■□□□ 1.53
CD55-205	ENST00000367067	MYH6	P13533	1939 aa		24.62	■■□□□ 1.53
CD55-205	ENST00000367067	PDC	P20941	246 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	SYT1	P21579	422 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	RAB3GAP1	Q15042	981 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	NTRK3	Q16288	839 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	CLEC10A	Q8IUN9	316 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	FAM184A	Q8NB25	1140 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	PPFIA3	O75145	1194 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	RRP1B	Q14684	758 aa	Known RBP	24.61	■■□□□ 1.53
CD55-205	ENST00000367067	SHROOM1	Q2M3G4	852 aa	Predicted RBP	24.61	■■□□□ 1.53
CD55-205	ENST00000367067	CTCFL	Q8NI51	663 aa	Predicted RBP	24.61	■■□□□ 1.53
CD55-205	ENST00000367067	MAP3K14	Q99558	947 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	KANSL2	Q9H9L4	492 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	CABP5	Q9NP86	173 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	RBM28	Q9NW13	759 aa	Known RBP	24.61	■■□□□ 1.53
CD55-205	ENST00000367067	KIF3A	Q9Y496	699 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	PPP2R3B	Q9Y5P8	575 aa		24.61	■■□□□ 1.53
CD55-205	ENST00000367067	WDR90	Q96KV7	1748 aa		24.6	■■□□□ 1.53
CD55-205	ENST00000367067	EPHX2	P34913	555 aa		24.6	■■□□□ 1.53
CD55-205	ENST00000367067	LARP1B	Q659C4	914 aa	Known RBP	24.6	■■□□□ 1.53
CD55-205	ENST00000367067	USP50	Q70EL3	339 aa	Predicted RBP	24.6	■■□□□ 1.53
CD55-205	ENST00000367067	CLIP2	Q9UDT6	1046 aa		24.6	■■□□□ 1.53
CD55-205	ENST00000367067	ATAD5	Q96QE3	1844 aa		24.59	■■□□□ 1.53
CD55-205	ENST00000367067	GH2	P01242	217 aa		24.59	■■□□□ 1.53
CD55-205	ENST00000367067	IFNAR1	P17181	557 aa		24.59	■■□□□ 1.53
CD55-205	ENST00000367067	SEPT2	Q15019	361 aa		24.59	■■□□□ 1.53
CD55-205	ENST00000367067	NBPF12	Q5TAG4	269 aa	Predicted RBP	24.59	■■□□□ 1.53
CD55-205	ENST00000367067	IQCA1L	A6NCM1	817 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	STX6	O43752	255 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	PDIA4	P13667	645 aa	Known RBP	24.58	■■□□□ 1.53
CD55-205	ENST00000367067	FDPS	P14324	419 aa	Known RBP	24.58	■■□□□ 1.53
CD55-205	ENST00000367067	KIF5B	P33176	963 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	JAG1	P78504	1218 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	DCPS	Q96C86	337 aa	Known RBP	24.58	■■□□□ 1.53
CD55-205	ENST00000367067	HOOK2	Q96ED9	719 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	ORC3	Q9UBD5	711 aa	Predicted RBP	24.58	■■□□□ 1.53
CD55-205	ENST00000367067	GUCY1A2	P33402	732 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	PHKB	Q93100	1093 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	ZDHHC9	Q9Y397	364 aa		24.58	■■□□□ 1.53
CD55-205	ENST00000367067	WDR33	Q9C0J8	1336 aa	Known RBP	24.57	■■□□□ 1.52
CD55-205	ENST00000367067	POTEC	B2RU33	542 aa		24.57	■■□□□ 1.52
CD55-205	ENST00000367067	BRD1	O95696	1058 aa		24.57	■■□□□ 1.52
CD55-205	ENST00000367067	ATP2B2	Q01814	1243 aa		24.57	■■□□□ 1.52
CD55-205	ENST00000367067	NYAP2	Q9P242	653 aa		24.57	■■□□□ 1.52
CD55-205	ENST00000367067	BAZ2B	Q9UIF8	2168 aa	Known RBP	24.57	■■□□□ 1.52
CD55-205	ENST00000367067	ICA1	Q05084	483 aa		24.56	■■□□□ 1.52
CD55-205	ENST00000367067	GRM4	Q14833	912 aa		24.56	■■□□□ 1.52
CD55-205	ENST00000367067	CMTR1	Q8N1G2	835 aa	Known RBP	24.56	■■□□□ 1.52
CD55-205	ENST00000367067	LRRC47	Q8N1G4	583 aa	Known RBP	24.56	■■□□□ 1.52
CD55-205	ENST00000367067	MTMR7	Q9Y216	660 aa		24.56	■■□□□ 1.52
CD55-205	ENST00000367067	DCAF8L1	A6NGE4	600 aa		24.56	■■□□□ 1.52
CD55-205	ENST00000367067	PHF20L1	A8MW92	1017 aa		24.56	■■□□□ 1.52
CD55-205	ENST00000367067	EEF2	P13639	858 aa	Known RBP	24.56	■■□□□ 1.52
CD55-205	ENST00000367067	CAP2	P40123	477 aa		24.56	■■□□□ 1.52
CD55-205	ENST00000367067	SSRP1	Q08945	709 aa	Known RBP	24.56	■■□□□ 1.52

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