RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 PHACTR4Q8IZ21 702 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 AGGF1Q8N302 714 aaeCLIP5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 THAP3Q8WTV1 239 aaPredicted RBP5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 CYB5D2Q8WUJ1 264 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 KIF2CQ99661 725 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 AKTIPQ9H8T0 292 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 KANSL2Q9H9L4 492 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 PIDD1Q9HB75 910 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 ZMYM5Q9UJ78 669 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 PCOLCE2Q9UKZ9 415 aa5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU6-28P-201ENST00000362378 RNGTTO60942 597 aaKnown RBP5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 LRIG2O94898 1065 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 SPATA31C1P0DKV0 1188 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 ZNF143P52747 638 aaPredicted RBP5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 GRIK4Q16099 956 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 GNPTABQ3T906 1256 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 KIAA1211LQ6NV74 962 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 SHISA2Q6UWI4 295 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 SPATC1Q76KD6 591 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 BEND7Q8N7W2 519 aaPredicted RBP5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 MFSD2AQ8NA29 543 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 CEP41Q9BYV8 373 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 ACSS3Q9H6R3 686 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 SUCOQ9UBS9 1254 aaKnown RBP5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 PCDHB10Q9UN67 800 aa5.49□□□□□ -1.53
RNU6-28P-201ENST00000362378 KDM2BQ8NHM5 1336 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 FAM86C2PA6NEL3 165 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 C9orf172C9J069 976 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SUSD5O60279 629 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 DIAPH1O60610 1272 aaKnown RBP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 GDF11O95390 407 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 PREPP48147 710 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SSRP1Q08945 709 aaKnown RBP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SQSTM1Q13501 440 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SLC10A6Q3KNW5 377 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 ARMCX6Q7L4S7 300 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 PODNQ7Z5L7 613 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 HOMER1Q86YM7 354 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 BAHD1Q8TBE0 780 aaPredicted RBP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 PPP1R13LQ8WUF5 828 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 APPBP2Q92624 585 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SMARCC1Q92922 1105 aaPredicted RBP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SLC6A18Q96N87 628 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 DPH2Q9BQC3 489 aaPredicted RBP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 SSU72Q9NP77 194 aaKnown RBP5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 FANCLQ9NW38 375 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 CNTNAP5Q8WYK1 1306 aa5.48□□□□□ -1.53
RNU6-28P-201ENST00000362378 ESYT3A0FGR9 886 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 CDC45O75419 566 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 ALX3O95076 343 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 IGHA1P01876 353 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 GBP1P32455 592 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 NRG1Q02297 640 aaPredicted RBP5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 LONRF2Q1L5Z9 754 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 PPFIBP1Q86W92 1011 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 DNAJB8Q8NHS0 232 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 EZH1Q92800 747 aaPredicted RBP5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 SGSM3Q96HU1 749 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 FAM46AQ96IP4 442 aaKnown RBP5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 NACC1Q96RE7 527 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 SPATA9Q9BWV2 254 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 SUSD2Q9UGT4 822 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 PFDN2Q9UHV9 154 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 CEP131Q9UPN4 1083 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 LEMD3Q9Y2U8 911 aa5.47□□□□□ -1.53
RNU6-28P-201ENST00000362378 COL17A1Q9UMD9 1497 aaPredicted RBP5.46□□□□□ -1.53
RNU6-28P-201ENST00000362378 KRBA1A5PL33 1030 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 IQCA1LA6NCM1 817 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 SART1O43290 800 aaKnown RBP5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 CLEC3AO75596 197 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 NAT2P11245 290 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 NOS3P29474 1203 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 USP11P51784 963 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 ZC3H12BQ5HYM0 836 aaKnown RBP5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 CDPF1Q6NVV7 123 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 C16orf86Q6ZW13 317 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 KIAA0907Q7Z7F0 614 aaPredicted RBP5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 WFDC12Q8WWY7 111 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 VWCEQ96DN2 955 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 UBL7Q96S82 380 aaPredicted RBP5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 USP21Q9UK80 565 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 ADAMTS8Q9UP79 889 aa5.46□□□□□ -1.54
RNU6-28P-201ENST00000362378 ANKRD34BA5PLL1 514 aa5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 C9IYK1 514 aa5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 ADCY3O60266 1144 aa5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 COL8A1P27658 744 aa5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 ADGRE1Q14246 886 aa5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 UVSSAQ2YD98 709 aa5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 AXDND1Q5T1B0 1012 aaPredicted RBP5.45□□□□□ -1.54
RNU6-28P-201ENST00000362378 NBPF12Q5TAG4 269 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms