RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 HDXQ7Z353 690 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
SCAF1-201ENST00000360565 CAMSAP1Q5T5Y3 1602 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 GOLGA6L7A0A1B0GV03 622 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 SNAP23O00161 211 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 PPP6R2O75170 966 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 HS2ST1Q7LGA3 356 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 BLIDQ8IZY5 108 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 SYNE4Q8N205 404 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 PIH1D3Q9NQM4 214 aaKnown RBP18.32■□□□□ 0.52
SCAF1-201ENST00000360565 CCDC172P0C7W6 258 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 SCG2P13521 617 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 CABP7Q86V35 215 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 SNX29Q8TEQ0 813 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 SH2B2O14492 632 aaPredicted RBP18.31■□□□□ 0.52
SCAF1-201ENST00000360565 MCAMP43121 646 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 RAPGEF1Q13905 1077 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 OGFOD1Q8N543 542 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 TRIML1Q8N9V2 468 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 SELENOOQ9BVL4 669 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 PPP2R2CQ9Y2T4 447 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 KIAA0753Q2KHM9 967 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 FAM13AO94988 1023 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 KRT13P13646 458 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 INF2Q27J81 1249 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 LCORLQ8N3X6 602 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 GPKOWQ92917 476 aaPredicted RBP eCLIP18.31■□□□□ 0.528e-6■■■□□ 18.6
SCAF1-201ENST00000360565 EEF2KMTQ96G04 330 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 CSRNP2Q9H175 543 aa18.31■□□□□ 0.52
SCAF1-201ENST00000360565 IFNAR1P17181 557 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 DCAF17Q5H9S7 520 aaPredicted RBP18.3■□□□□ 0.52
SCAF1-201ENST00000360565 REXO1Q8N1G1 1221 aaKnown RBP18.3■□□□□ 0.52
SCAF1-201ENST00000360565 SYMPKQ92797 1274 aaKnown RBP18.3■□□□□ 0.52
SCAF1-201ENST00000360565 OVOS2A0A0J9YW53 1432 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 OVOS2Q6IE36 1432 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 GOLGA8FQ08AF8 430 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 GOLGA8DPQ0D2H9 430 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 IFT81Q8WYA0 676 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 JAKMIP2Q96AA8 810 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
SCAF1-201ENST00000360565 VAV2P52735 878 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 UBE4AQ14139 1066 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 HLFQ16534 295 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
SCAF1-201ENST00000360565 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 CCDC174Q6PII3 467 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 FCHSD1Q86WN1 690 aa18.3■□□□□ 0.52
SCAF1-201ENST00000360565 FOXP1Q9H334 677 aaPredicted RBP18.3■□□□□ 0.52
SCAF1-201ENST00000360565 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 CDC25BP30305 580 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 GRAMD1CQ8IYS0 662 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 CDC42BPGQ6DT37 1551 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 ANKRD62A6NC57 917 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
SCAF1-201ENST00000360565 SPATA1Q5VX52 437 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 EYA3Q99504 573 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 RNF26Q9BY78 433 aaPredicted RBP18.29■□□□□ 0.52
SCAF1-201ENST00000360565 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
SCAF1-201ENST00000360565 GOLGA8HP0CJ92 632 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 RAD51AP2Q09MP3 1159 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 HERC4Q5GLZ8 1057 aaPredicted RBP18.29■□□□□ 0.52
SCAF1-201ENST00000360565 KIDINS220Q9ULH0 1771 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 DIP2CQ9Y2E4 1556 aa18.29■□□□□ 0.52
SCAF1-201ENST00000360565 GOLGA6L10A0A0M3HER8 536 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
SCAF1-201ENST00000360565 CHGBP05060 677 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 IKBKBO14920 756 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 PPP4R3AQ6IN85 833 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 PSMB7Q99436 277 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 LZTS2Q9BRK4 669 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 OPA1O60313 960 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 ADCY7P51828 1080 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 TUBB2AQ13885 445 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 CALCRLQ16602 461 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 WDR78Q5VTH9 848 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 OR8K1Q8NGG5 319 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 TUBB2BQ9BVA1 445 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 NUP58Q9BVL2 599 aa18.28■□□□□ 0.52
SCAF1-201ENST00000360565 KCNJ18B7U540 433 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 KCNJ12Q14500 433 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 MFSD14BQ5SR56 506 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 STRBPQ96SI9 672 aaKnown RBP18.27■□□□□ 0.52
SCAF1-201ENST00000360565 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.52
SCAF1-201ENST00000360565 TBC1D7Q9P0N9 293 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 KLRF2D3W0D1 207 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 COBLO75128 1261 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 ATP1A3P13637 1013 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 MORC3Q14149 939 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 PLS1Q14651 629 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
SCAF1-201ENST00000360565 LIFRP42702 1097 aa18.27■□□□□ 0.52
SCAF1-201ENST00000360565 MAGEA1P43355 309 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms