RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RNF40O75150 1001 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 VPS41P49754 854 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 CACYBPQ9HB71 228 aaKnown RBP17.74■□□□□ 0.43
COL18A1-203ENST00000359759 XAB2Q9HCS7 855 aaKnown RBP17.74■□□□□ 0.43
COL18A1-203ENST00000359759 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
COL18A1-203ENST00000359759 SEPT10Q9P0V9 454 aa17.74■□□□□ 0.43
COL18A1-203ENST00000359759 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 MGEA5O60502 916 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 SAT1P21673 171 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 LIG3P49916 1009 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 TIMM10P62072 90 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 CCDC125Q86Z20 511 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 DESI2Q9BSY9 194 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 NDUFB9Q9Y6M9 179 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 EXOC3O60645 756 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 SCYL1Q96KG9 808 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 PPP4R1Q8TF05 950 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 DPH5Q9H2P9 285 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 BCL2L12Q9HB09 334 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 SORBS3O60504 671 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 GABPB2Q8TAK5 448 aaPredicted RBP17.73■□□□□ 0.43
COL18A1-203ENST00000359759 STMN1P16949 149 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
COL18A1-203ENST00000359759 RBBP5Q15291 538 aaKnown RBP17.72■□□□□ 0.43
COL18A1-203ENST00000359759 CALCRLQ16602 461 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
COL18A1-203ENST00000359759 NSMCE1Q8WV22 266 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 ANO3Q9BYT9 981 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 KCNK3O14649 394 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 CABP7Q86V35 215 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 PRPF6O94906 941 aaKnown RBP17.72■□□□□ 0.43
COL18A1-203ENST00000359759 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
COL18A1-203ENST00000359759 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 A6NNZ2 444 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 NOP56O00567 594 aaKnown RBP17.72■□□□□ 0.43
COL18A1-203ENST00000359759 TUBB8Q3ZCM7 444 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 MLKLQ8NB16 471 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 BCRP11274 1271 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 RASSF2P50749 326 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 HVCN1Q96D96 273 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 SPDL1Q96EA4 605 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
COL18A1-203ENST00000359759 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
COL18A1-203ENST00000359759 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 RPSAP08865 295 aaKnown RBP17.71■□□□□ 0.43
COL18A1-203ENST00000359759 SERPINB6P35237 376 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.431e-5■■■□□ 15.6
COL18A1-203ENST00000359759 GJA3Q9Y6H8 435 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 CLTAP09496 248 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
COL18A1-203ENST00000359759 FLOT1O75955 427 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 ATP2A3Q93084 1043 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 RAB17Q9H0T7 212 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 NOD1Q9Y239 953 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.43
COL18A1-203ENST00000359759 MIER3Q7Z3K6 550 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 KLHL14Q9P2G3 628 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 LRWD1Q9UFC0 647 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 RAD50Q92878 1312 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 AMFRQ9UKV5 643 aa17.71■□□□□ 0.43
COL18A1-203ENST00000359759 BIRC2Q13490 618 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 KRT81Q14533 505 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 SCYL2Q6P3W7 929 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
COL18A1-203ENST00000359759 VCX3AQ9NNX9 186 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 DNM3Q9UQ16 869 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 ADCY8P40145 1251 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 IDI1Q13907 227 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 CROCCP2Q86T23 111 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 STAG1Q8WVM7 1258 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 PPIP5K1Q6PFW1 1433 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 JAK2O60674 1132 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 IFNB1P01574 187 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 CASP2P42575 452 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 DBN1Q16643 649 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
COL18A1-203ENST00000359759 DCLK2Q8N568 766 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.7■□□□□ 0.42
COL18A1-203ENST00000359759 KRIT1O00522 736 aa17.7■□□□□ 0.42
COL18A1-203ENST00000359759 INPP1P49441 399 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 LINS1Q8NG48 757 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 SUDS3Q9H7L9 328 aaPredicted RBP17.69■□□□□ 0.42
COL18A1-203ENST00000359759 SERTAD1Q9UHV2 236 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 TSKSQ9UJT2 592 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 FAF1Q9UNN5 650 aaPredicted RBP17.69■□□□□ 0.42
COL18A1-203ENST00000359759 PARP3Q9Y6F1 533 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 CFAP61Q8NHU2 1237 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 CAPS2Q9BXY5 557 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 CABLES1Q8TDN4 633 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 ADCY7P51828 1080 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms