RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TCP1P17987 556 aaKnown RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 RNASELQ05823 741 aaKnown RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ASIC2Q16515 512 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 TOGARAM2Q6ZUX3 1019 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 NME8Q8N427 588 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 KCNF1Q9H3M0 494 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 KIF9Q9HAQ2 790 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 HOMER3Q9NSC5 361 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 POLKQ9UBT6 870 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 FAM135BQ49AJ0 1406 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 MYH15Q9Y2K3 1946 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 GGCXP38435 758 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 TRPC3Q13507 836 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 MAP3K21Q5TCX8 1036 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ZC3H18Q86VM9 953 aaKnown RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 OSBPL9Q96SU4 736 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 MAP3K2Q9Y2U5 619 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 BAG2O95816 211 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.72□□□□□ -1.334e-9■■■■■ 79.6
VPS13B-203ENST00000358544 CCDC152Q4G0S7 254 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 CFAP61Q8NHU2 1237 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 FAM135AQ9P2D6 1515 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ENO4A6NNW6 628 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ZFXP17010 805 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 VPS41P49754 854 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 KCNV2Q8TDN2 545 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 WDR24Q96S15 920 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ZDHHC9Q9Y397 364 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.332e-7■■■■■ 28
VPS13B-203ENST00000358544 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 KRT2P35908 639 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 KRT40Q6A162 431 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 EMBQ6PCB8 327 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 CCDC13Q8IYE1 715 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 LRRC43Q8N309 656 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 HAUS1Q96CS2 278 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 KIF24Q5T7B8 1368 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ABCC4O15439 1325 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 CCDC169A6NNP5 214 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ST5P78524 1137 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 TBC1D1Q86TI0 1168 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ANGPTL2Q9UKU9 493 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 USP5P45974 858 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ADALQ6DHV7 355 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 RNF113AO15541 343 aaKnown RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ARHGAP18Q8N392 663 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 CDK13Q14004 1512 aaKnown RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 BEND3Q5T5X7 828 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 RILPL1Q5EBL4 403 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 PEX26Q7Z412 305 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 ST13P4Q8IZP2 240 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-203ENST00000358544 WNK1Q9H4A3 2382 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 SPOPO43791 374 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 SLC5A1P13866 664 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 MAGEA1P43355 309 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 FNBP4Q8N3X1 1017 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-203ENST00000358544 USP28Q96RU2 1077 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 EVPLQ92817 2033 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 RWDD2BP57060 319 aa6.71□□□□□ -1.33
VPS13B-203ENST00000358544 C2orf54Q08AI8 447 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 KRIT1O00522 736 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 GUCY2DQ02846 1103 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 DPCR1Q3MIW9 517 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 SCP2P22307 547 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 BIRC3Q13489 604 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 CCDC105Q8IYK2 499 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 PAG1Q9NWQ8 432 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF407Q9C0G0 2248 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 PI4KAP2A4QPH2 592 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 VWA3AA6NCI4 1184 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 MYSM1Q5VVJ2 828 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 RRAGAQ7L523 313 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 PI4KAP1Q8N8J0 262 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 PRPF38AQ8NAV1 312 aaKnown RBP6.71□□□□□ -1.34
VPS13B-203ENST00000358544 VPS37BQ9H9H4 285 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 GPIHBP1Q8IV16 184 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 PSD3Q9NYI0 1048 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 CTNND1O60716 968 aaKnown RBP6.71□□□□□ -1.34
VPS13B-203ENST00000358544 GAS8O95995 478 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 ANKRD20A3Q5VUR7 823 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 FAM167BQ9BTA0 163 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 PLCB4Q15147 1175 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 KLHL29Q96CT2 875 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 HINFPQ9BQA5 517 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 CSRNP2Q9H175 543 aa6.71□□□□□ -1.34
VPS13B-203ENST00000358544 TRIML1Q8N9V2 468 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 KAT14Q9H8E8 782 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 TRAF5O00463 557 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CSGALNACT2Q8N6G5 542 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 EPN1Q9Y6I3 576 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CNOT1A5YKK6 2376 aaKnown RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 ABTB2Q8N961 1025 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 XAB2Q9HCS7 855 aaKnown RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CTTNBP2NLQ9P2B4 639 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CHGBP05060 677 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 IRX4P78413 519 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms