RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PDILTQ8N807 584 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 CRAMP1Q96RY5 1269 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 PODXL2Q9NZ53 605 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 SALL1Q9NSC2 1324 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 ZDBF2Q9HCK1 2354 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 HSPD1P10809 573 aaKnown RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 PPP4R3BQ5MIZ7 849 aa6.68□□□□□ -1.34
CD47-201ENST00000355354 PIH1D3Q9NQM4 214 aaKnown RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 RIF1Q5UIP0 2472 aaKnown RBP6.68□□□□□ -1.34
CD47-201ENST00000355354 TPRP12270 2363 aaKnown RBP6.67□□□□□ -1.34
CD47-201ENST00000355354 PLXNA1Q9UIW2 1896 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 MYH1P12882 1939 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 PLA2G4AP47712 749 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 ELF2Q15723 593 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 EPSTI1Q96J88 318 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 GPBP1L1Q9HC44 474 aaPredicted RBP6.67□□□□□ -1.34
CD47-201ENST00000355354 PCDHA7Q9UN72 937 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 IL16Q14005 1332 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 MED12Q93074 2177 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 GNAI2P04899 355 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 CYP2D6P10635 497 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 IRF2BP1Q8IU81 584 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 MRPL44Q9H9J2 332 aaKnown RBP6.67□□□□□ -1.34
CD47-201ENST00000355354 BTBD11A6QL63 1104 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 BTBD18B2RXH4 712 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 PEX10O60683 326 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 REXO1L1PQ8IX06 675 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 SMC1BQ8NDV3 1235 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 RRAGCQ9HB90 399 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 GPR179Q6PRD1 2367 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 CABP4P57796 275 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 TLL2Q9Y6L7 1015 aa6.67□□□□□ -1.34
CD47-201ENST00000355354 ZSCAN22P10073 491 aaPredicted RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 MICALCLQ6ZW33 695 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 TBC1D5Q92609 795 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 MASTLQ96GX5 879 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 SAMSN1Q9NSI8 373 aaKnown RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 CTNNA3Q9UI47 895 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 ZNF638Q14966 1978 aaKnown RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 PLEKP08567 350 aaPredicted RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 GCC1Q96CN9 775 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 GRM8O00222 908 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 ADKP55263 362 aaKnown RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 TYRO3Q06418 890 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 METTL16Q86W50 562 aaKnown RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 NOA1Q8NC60 698 aaKnown RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 ATRNL1Q5VV63 1379 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 A0A087WZG4 1122 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 ZNF263O14978 683 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 LLGL1Q15334 1064 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 LRRFIP1Q32MZ4 808 aaKnown RBP6.66□□□□□ -1.34
CD47-201ENST00000355354 KSR1Q8IVT5 923 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 GPC2Q8N158 579 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 CHP1Q99653 195 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 NUDT12Q9BQG2 462 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 PRO3102Q9H379 93 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 CACNA1BQ00975 2339 aa6.66□□□□□ -1.34
CD47-201ENST00000355354 ASXL3Q9C0F0 2248 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 COL4A6Q14031 1691 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
CD47-201ENST00000355354 ZNF280AP59817 542 aaPredicted RBP6.65□□□□□ -1.34
CD47-201ENST00000355354 SUSD4Q5VX71 490 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 MIGA1Q8NAN2 632 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 SH2D3AQ9BRG2 576 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 HDAC6Q9UBN7 1215 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 EP300Q09472 2414 aaPredicted RBP6.65□□□□□ -1.34
CD47-201ENST00000355354 UBTFL1P0CB47 393 aaPredicted RBP6.65□□□□□ -1.34
CD47-201ENST00000355354 EXOSC10Q01780 885 aaKnown RBP6.65□□□□□ -1.34
CD47-201ENST00000355354 CTDSPL2Q05D32 466 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 ZSCAN25Q6NSZ9 544 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 LDHDQ86WU2 507 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 PLIN2Q99541 437 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 REXO2Q9Y3B8 237 aaKnown RBP6.65□□□□□ -1.34
CD47-201ENST00000355354 BSNQ9UPA5 3926 aa6.65□□□□□ -1.34
CD47-201ENST00000355354 ITPR1Q14643 2758 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 FAM205AQ6ZU69 1335 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 GIGYF2Q6Y7W6 1299 aaKnown RBP6.65□□□□□ -1.35
CD47-201ENST00000355354 VGLL2Q8N8G2 317 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 NEK11Q8NG66 645 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 PDIA3P30101 505 aaKnown RBP6.65□□□□□ -1.35
CD47-201ENST00000355354 PNOCQ13519 176 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 SF3B3Q15393 1217 aaKnown RBP6.65□□□□□ -1.35
CD47-201ENST00000355354 SMCR8Q8TEV9 937 aaPredicted RBP6.65□□□□□ -1.35
CD47-201ENST00000355354 CFAP53Q96M91 514 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 CHORDC1Q9UHD1 332 aaPredicted RBP6.65□□□□□ -1.35
CD47-201ENST00000355354 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.35
CD47-201ENST00000355354 HOXB7P09629 217 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 NPR1P16066 1061 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 JAG1P78504 1218 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 XPO4Q9C0E2 1151 aaKnown RBP6.64□□□□□ -1.35
CD47-201ENST00000355354 R3HDMLQ9H3Y0 253 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 CHMP4BQ9H444 224 aaKnown RBP6.64□□□□□ -1.35
CD47-201ENST00000355354 EVI5O60447 810 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 SRGAP2O75044 1071 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 EGFRP00533 1210 aa6.64□□□□□ -1.35
CD47-201ENST00000355354 RFC4P35249 363 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms