RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
SYNCRIP-201ENST00000355238 KCNK3O14649 394 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 LRRC23Q53EV4 343 aaPredicted RBP14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 CCDC13Q8IYE1 715 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 APPBP2Q92624 585 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 MPHOSPH6Q99547 160 aaKnown RBP14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 EPN1Q9Y6I3 576 aaPredicted RBP14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 E2F5Q15329 346 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 TNNI3KQ59H18 835 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 FPGT-TNNI3KV9GXZ4 949 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 ARHGAP42A6NI28 874 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 MORC3Q14149 939 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 NRBP1Q9UHY1 535 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 NESP48681 1621 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 BAG2O95816 211 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 BCRP11274 1271 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 RNASELQ05823 741 aaKnown RBP14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 TTC6Q86TZ1 520 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 GRK7Q8WTQ7 553 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 ZNF274Q96GC6 653 aaPredicted RBP14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 VPS37BQ9H9H4 285 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
SYNCRIP-201ENST00000355238 C6orf229H3BNL8 230 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 SPATA1Q5VX52 437 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 CACTINQ8WUQ7 758 aaKnown RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 FAM207AQ9NSI2 230 aaPredicted RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 FANCLQ9NW38 375 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 MAP3K5Q99683 1374 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 RAPGEF3O95398 923 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 PARP1P09874 1014 aaKnown RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 GSPT1P15170 499 aaKnown RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 E2F4Q16254 413 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 KRT24Q2M2I5 525 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 CFAP61Q8NHU2 1237 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 GABPB2Q8TAK5 448 aaPredicted RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 H7C1D1 291 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 PNMA6AP0CW24 399 aaPredicted RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 PLCG2P16885 1265 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 IDI1Q13907 227 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 SLMAPQ14BN4 828 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 CRCPO75575 148 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 FBLN1P23142 703 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 SESN3P58005 492 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 PPFIA2O75334 1257 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 PHBP35232 272 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 MRPL12P52815 198 aaKnown RBP14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 KBTBD3Q8NAB2 608 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 MCM9Q9NXL9 1143 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 SCOCQ9UIL1 159 aa14.04□□□□□ -0.16
SYNCRIP-201ENST00000355238 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 IKBKBO14920 756 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 DBN1Q16643 649 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 SLFNL1Q499Z3 407 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 DSCC1Q9BVC3 393 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 PARD6BQ9BYG5 372 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 INTS9Q9NV88 658 aaKnown RBP14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 FAM135BQ49AJ0 1406 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 MBD4O95243 580 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 FBXO38Q6PIJ6 1188 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 ZNF354CQ86Y25 554 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 CCHCR1Q8TD31 782 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 PHACTR3Q96KR7 559 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 V9GY48 417 aaPredicted RBP14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 TADA2BQ86TJ2 420 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 AMOTL2Q9Y2J4 779 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 RIMS2Q9UQ26 1411 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 RUNDC3BQ96NL0 473 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 STK10O94804 968 aaKnown RBP14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 TTC19Q6DKK2 380 aaPredicted RBP14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 TCP11Q8WWU5 503 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 HVCN1Q96D96 273 aa14.03□□□□□ -0.16
SYNCRIP-201ENST00000355238 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 GUCY2CP25092 1073 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 DIXDC1Q155Q3 683 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 KCTD16Q68DU8 428 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 FNBP1Q96RU3 617 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 CNOT10Q9H9A5 744 aaKnown RBP14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 GUCY2DQ02846 1103 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 KRT25Q7Z3Z0 450 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 GLT8D2Q9H1C3 349 aa14.02□□□□□ -0.16
SYNCRIP-201ENST00000355238 ALS2CLQ60I27 953 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 PPP4R1Q8TF05 950 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 CARD14Q9BXL6 1004 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 UHRF1BP1Q6BDS2 1440 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms