RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TMC6Q7Z403 805 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 IP6K1Q92551 441 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 XPO4Q9C0E2 1151 aaKnown RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 ST7Q9NRC1 585 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 ARGLU1Q9NWB6 273 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 IFNKQ9P0W0 207 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 PCDHA7Q9UN72 937 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 RGPD8O14715 1765 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 SH3TC1Q8TE82 1336 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 IKBKBO14920 756 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 RNMTO43148 476 aaKnown RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 TADA3O75528 432 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 YEATS4O95619 227 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 DDX58O95786 925 aaKnown RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 ME1P48163 572 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 KCNQ4P56696 695 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 CEBPZQ03701 1054 aaKnown RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 TEFQ10587 303 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 NCAPHQ15003 741 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 CWF19L2Q2TBE0 894 aaKnown RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 MCMDC2Q4G0Z9 681 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 ARHGAP29Q52LW3 1261 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 TMCO3Q6UWJ1 677 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 STOX1Q6ZVD7 989 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 LDHDQ86WU2 507 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 LRRN4CLQ8ND94 238 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 LTV1Q96GA3 475 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 ZNF274Q96GC6 653 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 DCAF5Q96JK2 942 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 DNAJC2Q99543 621 aaKnown RBP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 FTOQ9C0B1 505 aaKnown RBP eCLIP8.66□□□□□ -1.02
C11orf54-202ENST00000354421 TMX1Q9H3N1 280 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 STXBP5LQ9Y2K9 1186 aa8.66□□□□□ -1.02
C11orf54-202ENST00000354421 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.02
C11orf54-202ENST00000354421 LAMA4Q16363 1823 aa8.65□□□□□ -1.02
C11orf54-202ENST00000354421 NEDD4P46934 1319 aa8.65□□□□□ -1.02
C11orf54-202ENST00000354421 EFCAB8A8MWE9 144 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 EXOC5O00471 708 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 MYO1BO43795 1136 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 SMC2O95347 1197 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 PROSER3Q2NL68 480 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 PLEKHO1Q53GL0 409 aaPredicted RBP8.65□□□□□ -1.03
C11orf54-202ENST00000354421 MUM1L1Q5H9M0 696 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 CCDC158Q5M9N0 1113 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 CYP4F22Q6NT55 531 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 TRIM65Q6PJ69 517 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 TXLNBQ8N3L3 684 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 FBXL16Q8N461 479 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 KCNG4Q8TDN1 519 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 UBXN4Q92575 508 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 HAUS7Q99871 368 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 SDF4Q9BRK5 362 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 COPRSQ9NQ92 184 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 DDX21Q9NR30 783 aaKnown RBP eCLIP8.65□□□□□ -1.03
C11orf54-202ENST00000354421 DNAI1Q9UI46 699 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 WASF2Q9Y6W5 498 aa8.65□□□□□ -1.03
C11orf54-202ENST00000354421 PALLDQ8WX93 1383 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 A0A087WWV3 80 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 ERICH4A6NGS2 130 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 CAPN5O15484 640 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-202ENST00000354421 HOXA2O43364 376 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 AOC2O75106 756 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 CAPN2P17655 700 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 GMPRP36959 345 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
C11orf54-202ENST00000354421 EVCP57679 992 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 GRM1Q13255 1194 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
C11orf54-202ENST00000354421 DPCR1Q3MIW9 517 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 ZNF530Q6P9A1 599 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-202ENST00000354421 CTU1Q7Z7A3 348 aaKnown RBP8.64□□□□□ -1.03
C11orf54-202ENST00000354421 REXO1L1PQ8IX06 675 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 LINC00301Q8NCQ3 95 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 DSCC1Q9BVC3 393 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 HELLSQ9NRZ9 838 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 FPGT-TNNI3KV9GXZ4 949 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 NFAT5O94916 1531 aa8.64□□□□□ -1.03
C11orf54-202ENST00000354421 KDM6AO15550 1401 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-202ENST00000354421 BTAF1O14981 1849 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 SIAH2O43255 324 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 CBFA2T2O43439 604 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 IGKV5-2P06315 115 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 SLC3A2P08195 630 aaKnown RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 PDIA3P30101 505 aaKnown RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 RFX5P48382 616 aaPredicted RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 NDUFA8P51970 172 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 FANCCQ00597 558 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 APOBRQ0VD83 1088 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 ZRSR1Q15695 479 aaKnown RBP8.63□□□□□ -1.03
C11orf54-202ENST00000354421 NBPF6Q5VWK0 638 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 CCDC129Q6ZRS4 1044 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 MNS1Q8NEH6 495 aa8.63□□□□□ -1.03
C11orf54-202ENST00000354421 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms