RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PPIP5K2O43314 1243 aa25.6■■□□□ 1.69
NPAS3-201ENST00000346562 XRCC6P12956 609 aaKnown RBP eCLIP25.6■■□□□ 1.69
NPAS3-201ENST00000346562 HHATQ5VTY9 493 aa25.6■■□□□ 1.69
NPAS3-201ENST00000346562 MIER3Q7Z3K6 550 aa25.6■■□□□ 1.69
NPAS3-201ENST00000346562 RSRC1Q96IZ7 334 aaKnown RBP25.6■■□□□ 1.69
NPAS3-201ENST00000346562 TBC1D7Q9P0N9 293 aa25.6■■□□□ 1.69
NPAS3-201ENST00000346562 EAPPQ56P03 285 aaPredicted RBP25.6■■□□□ 1.69
NPAS3-201ENST00000346562 CCDC89Q8N998 374 aa25.6■■□□□ 1.69
NPAS3-201ENST00000346562 ZHX1Q9UKY1 873 aaPredicted RBP25.6■■□□□ 1.69
NPAS3-201ENST00000346562 RIOK3O14730 519 aaKnown RBP25.59■■□□□ 1.69
NPAS3-201ENST00000346562 FANCCQ00597 558 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 SATB1Q01826 763 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 GCKRQ14397 625 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 FAM98CQ17RN3 349 aaKnown RBP25.59■■□□□ 1.69
NPAS3-201ENST00000346562 B4GALNT4Q76KP1 1039 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 SLC12A2P55011 1212 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 CASC4Q6P4E1 433 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 VCX3BQ9H321 246 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 TBX22Q9Y458 520 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 TMTC1Q8IUR5 882 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 KBTBD3Q8NAB2 608 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 NELFBQ8WX92 580 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 GLG1Q92896 1179 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 SNX14Q9Y5W7 946 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 ZNF608Q9ULD9 1512 aaPredicted RBP25.59■■□□□ 1.69
NPAS3-201ENST00000346562 CPA1P15085 419 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 KLHL30Q0D2K2 578 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 PLCB1Q9NQ66 1216 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 UHRF1BP1Q6BDS2 1440 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 MED10Q9BTT4 135 aa25.59■■□□□ 1.69
NPAS3-201ENST00000346562 ZNF532Q9HCE3 1301 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 CCDC62Q6P9F0 684 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 EDC4Q6P2E9 1401 aaKnown RBP25.58■■□□□ 1.69
NPAS3-201ENST00000346562 ATF7P17544 494 aaPredicted RBP25.58■■□□□ 1.69
NPAS3-201ENST00000346562 ARHGEF16Q5VV41 709 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 REXO1Q8N1G1 1221 aaKnown RBP25.58■■□□□ 1.69
NPAS3-201ENST00000346562 TNNI1P19237 187 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 TTC31Q49AM3 519 aaPredicted RBP25.58■■□□□ 1.69
NPAS3-201ENST00000346562 BEND3Q5T5X7 828 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 TRPC6Q9Y210 931 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 ZMYM3Q14202 1370 aa25.58■■□□□ 1.69
NPAS3-201ENST00000346562 USP40Q9NVE5 1235 aa25.58■■□□□ 1.68
NPAS3-201ENST00000346562 PALM3A6NDB9 673 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 BAG6P46379 1132 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 RNASE9P60153 205 aaKnown RBP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 ERO1AQ96HE7 468 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 MLXIPQ9HAP2 919 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 A6NNZ2 444 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 GAS7O60861 476 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 POSTNQ15063 836 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 TUBB8Q3ZCM7 444 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 NELFCDQ8IXH7 590 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 NCOA5Q9HCD5 579 aaKnown RBP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 CEP104O60308 925 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 GBP1P32455 592 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 PABPC4Q13310 644 aaKnown RBP eCLIP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 ATP8A2Q9NTI2 1148 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 TNNQ9UQP3 1299 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 UGGT2Q9NYU1 1516 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 RUFY4Q6ZNE9 571 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 ZBTB8OSQ8IWT0 167 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 YARSP54577 528 aaKnown RBP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 MTMR3Q13615 1198 aa25.57■■□□□ 1.68
NPAS3-201ENST00000346562 RAB3IPQ96QF0 476 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-201ENST00000346562 CASQ2O14958 399 aaPredicted RBP25.56■■□□□ 1.68
NPAS3-201ENST00000346562 IMPACTQ9P2X3 320 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.56■■□□□ 1.68
NPAS3-201ENST00000346562 APBA3O96018 575 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 G2E3Q7L622 706 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 ATP10BO94823 1461 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 TPH2Q8IWU9 490 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 ARHGAP24Q8N264 748 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 TFAP4Q01664 338 aa25.56■■□□□ 1.68
NPAS3-201ENST00000346562 ZBTB7BO15156 539 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-201ENST00000346562 PPP2R5CQ13362 524 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 CCDC105Q8IYK2 499 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 TTLL3Q9Y4R7 772 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 SUCLG2Q96I99 432 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 TAB2Q9NYJ8 693 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 PARP2Q9UGN5 583 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 RLBP1P12271 317 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 VCXQ9H320 206 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 NOC2LQ9Y3T9 749 aaKnown RBP25.55■■□□□ 1.68
NPAS3-201ENST00000346562 FAM102BQ5T8I3 360 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 CCDC84Q86UT8 332 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-201ENST00000346562 NUF2Q9BZD4 464 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 MAGEA1P43355 309 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 KRT40Q6A162 431 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 TRIM31Q9BZY9 425 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 PNMA2Q9UL42 364 aa25.55■■□□□ 1.68
NPAS3-201ENST00000346562 ZNF131P52739 623 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 PPARAQ07869 468 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 SND1Q7KZF4 910 aaKnown RBP eCLIP25.54■■□□□ 1.68
NPAS3-201ENST00000346562 MYO1AQ9UBC5 1043 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 USP21Q9UK80 565 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 H0YCG3 227 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 OATP04181 439 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 DCAF15Q66K64 600 aa25.54■■□□□ 1.68
NPAS3-201ENST00000346562 ATP2A3Q93084 1043 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms