RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-201ENST00000343575 RASA3Q14644 834 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 IFIT1BQ5T764 474 aaKnown RBP17.17■□□□□ 0.34
CXCL12-201ENST00000343575 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 DGKHQ86XP1 1220 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-201ENST00000343575 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 NID2Q14112 1375 aa17.17■□□□□ 0.34
CXCL12-201ENST00000343575 ZBTB43O43298 467 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 TPM2P07951 284 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
CXCL12-201ENST00000343575 NTRK3Q16288 839 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 SMC3Q9UQE7 1217 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
CXCL12-201ENST00000343575 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 CLEC10AQ8IUN9 316 aa17.16■□□□□ 0.34
CXCL12-201ENST00000343575 LLPHQ9BRT6 129 aaKnown RBP17.16■□□□□ 0.34
CXCL12-201ENST00000343575 GZF1Q9H116 711 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-201ENST00000343575 FDPSP14324 419 aaKnown RBP17.15■□□□□ 0.34
CXCL12-201ENST00000343575 CRACR2BQ8N4Y2 399 aaPredicted RBP17.15■□□□□ 0.34
CXCL12-201ENST00000343575 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
CXCL12-201ENST00000343575 PANK2Q9BZ23 570 aa17.15■□□□□ 0.34
CXCL12-201ENST00000343575 TAOK2Q9UL54 1235 aa17.15■□□□□ 0.34
CXCL12-201ENST00000343575 RCAN1P53805 252 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
CXCL12-201ENST00000343575 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 MTMR4Q9NYA4 1195 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 GUCY1A2P33402 732 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 FANCBQ8NB91 859 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 CCDC17Q96LX7 622 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 DEFB129Q9H1M3 183 aa17.14■□□□□ 0.33
CXCL12-201ENST00000343575 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
CXCL12-201ENST00000343575 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
CXCL12-201ENST00000343575 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
CXCL12-201ENST00000343575 GLTPD2A6NH11 291 aa17.13■□□□□ 0.33
CXCL12-201ENST00000343575 TBC1D12O60347 775 aa17.13■□□□□ 0.33
CXCL12-201ENST00000343575 CERKLQ49MI3 558 aaPredicted RBP17.13■□□□□ 0.33
CXCL12-201ENST00000343575 MIGA2Q7L4E1 593 aa17.13■□□□□ 0.33
CXCL12-201ENST00000343575 DDX11Q96FC9 970 aa17.13■□□□□ 0.33
CXCL12-201ENST00000343575 STX8Q9UNK0 236 aa17.13■□□□□ 0.33
CXCL12-201ENST00000343575 POTECB2RU33 542 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 SYT1P21579 422 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 TNFAIP1Q13829 316 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 CCDC178Q5BJE1 867 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 NUP133Q8WUM0 1156 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.12■□□□□ 0.33
CXCL12-201ENST00000343575 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
CXCL12-201ENST00000343575 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 DDAH1O94760 285 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 BRD1O95696 1058 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 TNNI2P48788 182 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 FUT2Q10981 343 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 SYNE3Q6ZMZ3 975 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 CATIPQ7Z7H3 387 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
CXCL12-201ENST00000343575 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
CXCL12-201ENST00000343575 GDF11O95390 407 aa17.11■□□□□ 0.33
CXCL12-201ENST00000343575 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
CXCL12-201ENST00000343575 RTN1Q16799 776 aa17.11■□□□□ 0.33
CXCL12-201ENST00000343575 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
CXCL12-201ENST00000343575 CMTR1Q8N1G2 835 aaKnown RBP17.11■□□□□ 0.33
CXCL12-201ENST00000343575 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
CXCL12-201ENST00000343575 DHX16O60231 1041 aaKnown RBP17.1■□□□□ 0.33
CXCL12-201ENST00000343575 LMOD1P29536 600 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-201ENST00000343575 SEPT2Q15019 361 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 NBPF12Q5TAG4 269 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-201ENST00000343575 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
CXCL12-201ENST00000343575 PHF20L1A8MW92 1017 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 MPHOSPH10O00566 681 aaKnown RBP17.1■□□□□ 0.33
CXCL12-201ENST00000343575 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 IFNAR1P17181 557 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 NUCB2P80303 420 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
CXCL12-201ENST00000343575 PHKBQ93100 1093 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
CXCL12-201ENST00000343575 CPLX1O14810 134 aa17.09■□□□□ 0.33
CXCL12-201ENST00000343575 STX6O43752 255 aa17.09■□□□□ 0.33
CXCL12-201ENST00000343575 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
CXCL12-201ENST00000343575 TERF1P54274 439 aa17.09■□□□□ 0.33
CXCL12-201ENST00000343575 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
CXCL12-201ENST00000343575 ABCB5Q2M3G0 1257 aa17.09■□□□□ 0.33
CXCL12-201ENST00000343575 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
CXCL12-201ENST00000343575 DLK2Q6UY11 383 aa17.09■□□□□ 0.33
CXCL12-201ENST00000343575 APOBEC3FQ8IUX4 373 aaKnown RBP17.09■□□□□ 0.33
CXCL12-201ENST00000343575 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
CXCL12-201ENST00000343575 TTLL1O95922 423 aa17.08■□□□□ 0.33
CXCL12-201ENST00000343575 GH2P01242 217 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms