RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PDE4BQ07343 736 aa18.35■□□□□ 0.53
TNFRSF12A-202ENST00000341627 SHROOM1Q2M3G4 852 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF12A-202ENST00000341627 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
TNFRSF12A-202ENST00000341627 OTOP1Q7RTM1 612 aa18.35■□□□□ 0.53
TNFRSF12A-202ENST00000341627 ERO1AQ96HE7 468 aa18.35■□□□□ 0.53
TNFRSF12A-202ENST00000341627 TRIM17Q9Y577 477 aa18.35■□□□□ 0.53
TNFRSF12A-202ENST00000341627 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
TNFRSF12A-202ENST00000341627 FGAP02671 866 aa18.34■□□□□ 0.53
TNFRSF12A-202ENST00000341627 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF12A-202ENST00000341627 C17orf99Q6UX52 265 aa18.34■□□□□ 0.53
TNFRSF12A-202ENST00000341627 GADL1Q6ZQY3 521 aa18.34■□□□□ 0.53
TNFRSF12A-202ENST00000341627 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
TNFRSF12A-202ENST00000341627 PHIPQ8WWQ0 1821 aa18.33■□□□□ 0.53
TNFRSF12A-202ENST00000341627 ADGRA2Q96PE1 1338 aa18.33■□□□□ 0.53
TNFRSF12A-202ENST00000341627 USP17L10C9JJH3 530 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 AKR1B1P15121 316 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 BACE1P56817 501 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 MTMR2Q13614 643 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 SEPT2Q15019 361 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PROCA1Q8NCQ7 364 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 FEZ1Q99689 392 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TMOD4Q9NZQ9 345 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 MYH8P13535 1937 aa18.33■□□□□ 0.52
TNFRSF12A-202ENST00000341627 RASA1P20936 1047 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 HMGCS2P54868 508 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 EFCC1Q9HA90 598 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ANAPC4Q9UJX5 808 aa18.32■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CYP2C8P10632 490 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 RGS19P49795 217 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 USP14P54578 494 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.521e-12■□□□□ 9.7
TNFRSF12A-202ENST00000341627 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CPA4Q9UI42 421 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 SLC45A1Q9Y2W3 748 aa18.31■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PRDM1O75626 825 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 LACTBP83111 547 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ICA1Q05084 483 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PARK7Q99497 189 aaKnown RBP18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ARHGAP39Q9C0H5 1083 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 KIAA1683Q9H0B3 1180 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ARHGEF10LQ9HCE6 1279 aa18.3■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PTPRFP10586 1907 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ZNF213O14771 459 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 SGSM2O43147 1006 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TREML2Q5T2D2 321 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ACER1Q8TDN7 264 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 IL25Q9H293 177 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 PNMA3Q9UL41 463 aa18.29■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TSPY3P0CV98 308 aa18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TSPY8P0CW00 308 aa18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 BCRP11274 1271 aa18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CTGFP29279 349 aa18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 HAND2P61296 217 aa18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 IMMTQ16891 758 aaKnown RBP18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.28■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ORC4O43929 436 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CDC45O75419 566 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 OSBPP22059 807 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TFAP4Q01664 338 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ATP2B2Q01814 1243 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TOMM22Q9NS69 142 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 EMILIN3Q9NT22 766 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 CENPFP49454 3210 aa18.27■□□□□ 0.52
TNFRSF12A-202ENST00000341627 TSPY2A6NKD2 308 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 RANBP6O60518 1105 aaKnown RBP18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 FGRP09769 529 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 EEF2P13639 858 aaKnown RBP18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 SOX10P56693 466 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ARHGEF6Q15052 776 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 PPP4R3BQ5MIZ7 849 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 AKNAD1Q5T1N1 836 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 NEDD1Q8NHV4 660 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 TMX2Q9Y320 296 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 LOC285556D6RIA3 1793 aa18.26■□□□□ 0.51
TNFRSF12A-202ENST00000341627 A0A1W2PRG0 241 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 NT5C2P49902 561 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 KIF22Q14807 665 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms