RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 CCT6AP40227 531 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 EVCP57679 992 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 RNASE9P60153 205 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 SMARCE1Q969G3 411 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZNF512BQ96KM6 892 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 PRKAB2O43741 272 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 ADKP55263 362 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 KRBA2Q6ZNG9 492 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 CRAMP1Q96RY5 1269 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 ALG1Q9BT22 464 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 DSCC1Q9BVC3 393 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 KIF5CO60282 957 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 FGAP02671 866 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 CUL4AQ13619 759 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 DHX58Q96C10 678 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 CRACR2AQ9BSW2 395 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 VAT1LQ9HCJ6 419 aa11.91□□□□□ -0.5
CAPRIN1-201ENST00000341394 POLD1P28340 1107 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 GRIK5Q16478 980 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 DOK7Q18PE1 504 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 ZFYVE27Q5T4F4 411 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 RNF187Q5TA31 235 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 SPTLC2O15270 562 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 MAGEC2Q9UBF1 373 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 USP5P45974 858 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 USP28Q96RU2 1077 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 ACBD3Q9H3P7 528 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 ARFGAP3Q9NP61 516 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 JADE2Q9NQC1 790 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 OGFRQ9NZT2 677 aa11.9□□□□□ -0.5
CAPRIN1-201ENST00000341394 SRGNP10124 158 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 CEP89Q96ST8 783 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 EPB41L4AQ9HCS5 686 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 GUCA1BQ9UMX6 200 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 NRXN2Q9P2S2 1712 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZSCAN12O43309 604 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 MYO1BO43795 1136 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 ERLIN1O75477 346 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 EPS15P42566 896 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 METAP2P50579 478 aaKnown RBP eCLIP11.89□□□□□ -0.518e-7■□□□□ 8.2
CAPRIN1-201ENST00000341394 TERF1P54274 439 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 GTF2IP78347 998 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 AATFQ9NY61 560 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 N4BP3O15049 544 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZNF569Q5MCW4 686 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 C11orf57Q6ZUT1 292 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 FBXO33Q7Z6M2 555 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
CAPRIN1-201ENST00000341394 SEMA3EO15041 775 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 RPS6KB1P23443 525 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 ARID5AQ03989 594 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 LCORLQ8N3X6 602 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 CCDC113Q9H0I3 377 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 SEPT11Q9NVA2 429 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 PRC1O43663 620 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 PRDX5P30044 214 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 E7EWF7 191 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 LDHCP07864 332 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 XBP1P17861 261 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 RBM5P52756 815 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 PTPROQ16827 1216 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 SDR42E1Q8WUS8 393 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 EYA3Q99504 573 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZNHIT6Q9NWK9 470 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 USP27XA6NNY8 438 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 MFSD14BQ5SR56 506 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 GTPBP4Q9BZE4 634 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 CD209Q9NNX6 404 aa11.88□□□□□ -0.51
CAPRIN1-201ENST00000341394 EIF3JO75822 258 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 R3HDM1Q15032 1099 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 NCOA7Q8NI08 942 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 TM6SF1Q9BZW5 370 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 BRMS1Q9HCU9 246 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 ATP6V0A2Q9Y487 856 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 IDEP14735 1019 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 HOXA10P31260 410 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 DYNLL1P63167 89 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms