RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 USP17L2Q6R6M4 530 aa20.58■□□□□ 0.89
BRCC3-202ENST00000340647 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.58■□□□□ 0.89
BRCC3-202ENST00000340647 ATP8A2Q9NTI2 1148 aa20.58■□□□□ 0.89
BRCC3-202ENST00000340647 TMOD4Q9NZQ9 345 aa20.58■□□□□ 0.89
BRCC3-202ENST00000340647 USP17L12C9JPN9 530 aa20.57■□□□□ 0.88
BRCC3-202ENST00000340647 USP17L21D6R901 530 aa20.57■□□□□ 0.88
BRCC3-202ENST00000340647 TNPO2O14787 897 aaKnown RBP20.57■□□□□ 0.88
BRCC3-202ENST00000340647 HERVK_113P62684 666 aa20.57■□□□□ 0.88
BRCC3-202ENST00000340647 PABPC4Q13310 644 aaKnown RBP eCLIP20.57■□□□□ 0.88
BRCC3-202ENST00000340647 ZYXQ15942 572 aaKnown RBP20.57■□□□□ 0.88
BRCC3-202ENST00000340647 RAET1EQ8TD07 263 aa20.57■□□□□ 0.88
BRCC3-202ENST00000340647 STRBPQ96SI9 672 aaKnown RBP20.57■□□□□ 0.88
BRCC3-202ENST00000340647 KIAA1683Q9H0B3 1180 aa20.57■□□□□ 0.88
BRCC3-202ENST00000340647 CNMDO75829 334 aa20.56■□□□□ 0.88
BRCC3-202ENST00000340647 ELNP15502 786 aa20.56■□□□□ 0.88
BRCC3-202ENST00000340647 IRF5Q13568 498 aa20.56■□□□□ 0.88
BRCC3-202ENST00000340647 CTR9Q6PD62 1173 aa20.56■□□□□ 0.88
BRCC3-202ENST00000340647 CLEC10AQ8IUN9 316 aa20.56■□□□□ 0.88
BRCC3-202ENST00000340647 GSG1L2A8MUP6 293 aa20.55■□□□□ 0.88
BRCC3-202ENST00000340647 ADCY3O60266 1144 aa20.55■□□□□ 0.88
BRCC3-202ENST00000340647 AKR1B1P15121 316 aa20.55■□□□□ 0.88
BRCC3-202ENST00000340647 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
BRCC3-202ENST00000340647 SLC4A4Q9Y6R1 1079 aa20.55■□□□□ 0.88
BRCC3-202ENST00000340647 A0A0G2JMZ2 1700 aa20.55■□□□□ 0.88
BRCC3-202ENST00000340647 TTC41PQ6P2S7 1318 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 M0R2C6 588 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 CCL5P13501 91 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 VCAM1P19320 739 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 CDK8P49336 464 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
BRCC3-202ENST00000340647 CATSPERGQ6ZRH7 1159 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 SLAIN1Q8ND83 568 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 PORCNQ9H237 461 aa20.54■□□□□ 0.88
BRCC3-202ENST00000340647 EPB41L4AQ9HCS5 686 aaPredicted RBP20.54■□□□□ 0.88
BRCC3-202ENST00000340647 RNF113AO15541 343 aaKnown RBP20.53■□□□□ 0.88
BRCC3-202ENST00000340647 ZSCAN25Q6NSZ9 544 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 C16orf86Q6ZW13 317 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 PXYLP1Q8TE99 480 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 APPBP2Q92624 585 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 SEC62Q99442 399 aaKnown RBP20.53■□□□□ 0.88
BRCC3-202ENST00000340647 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
BRCC3-202ENST00000340647 UNC93B1Q9H1C4 597 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 CABP5Q9NP86 173 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
BRCC3-202ENST00000340647 COL11A1P12107 1806 aaPredicted RBP20.53■□□□□ 0.88
BRCC3-202ENST00000340647 HDAC1Q13547 482 aaPredicted RBP20.52■□□□□ 0.88
BRCC3-202ENST00000340647 UBE2Q1Q7Z7E8 422 aa20.52■□□□□ 0.88
BRCC3-202ENST00000340647 USP17L15C9J2P7 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L13C9JLJ4 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L11C9JVI0 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L18D6R9N7 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L22D6RA61 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L17D6RBQ6 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L19D6RCP7 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L20D6RJB6 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 INHAP05111 366 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
BRCC3-202ENST00000340647 ERVK-9P63128 1117 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 ERVK-24P63145 666 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP17L24Q0WX57 530 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 TRIM32Q13049 653 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 GPRC5AQ8NFJ5 357 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 USP6NLQ92738 828 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 COA7Q96BR5 231 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 FEZ1Q99689 392 aa20.51■□□□□ 0.87
BRCC3-202ENST00000340647 SZT2Q5T011 3432 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 MPHOSPH10O00566 681 aaKnown RBP20.5■□□□□ 0.87
BRCC3-202ENST00000340647 FOXP2O15409 715 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 GPAA1O43292 621 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 GJB1P08034 283 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 GJA8P48165 433 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 USP14P54578 494 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 SBK1Q52WX2 424 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 LBX2Q6XYB7 198 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 GPATCH3Q96I76 525 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 RPAP3Q9H6T3 665 aaPredicted RBP20.5■□□□□ 0.87
BRCC3-202ENST00000340647 BTBD7Q9P203 1132 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 ALPK3Q96L96 1907 aa20.5■□□□□ 0.87
BRCC3-202ENST00000340647 ZNFX1Q9P2E3 1918 aaKnown RBP20.49■□□□□ 0.87
BRCC3-202ENST00000340647 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
BRCC3-202ENST00000340647 SPDYE16A6NNV3 312 aaPredicted RBP20.49■□□□□ 0.87
BRCC3-202ENST00000340647 MX1P20591 662 aa20.49■□□□□ 0.87
BRCC3-202ENST00000340647 PAGR1Q9BTK6 254 aa20.49■□□□□ 0.87
BRCC3-202ENST00000340647 RNF208Q9H0X6 261 aa20.49■□□□□ 0.87
BRCC3-202ENST00000340647 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
BRCC3-202ENST00000340647 ROBO3Q96MS0 1386 aa20.48■□□□□ 0.87
BRCC3-202ENST00000340647 GLRX3O76003 335 aaKnown RBP20.48■□□□□ 0.87
BRCC3-202ENST00000340647 MORN1Q5T089 497 aa20.48■□□□□ 0.87
BRCC3-202ENST00000340647 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
BRCC3-202ENST00000340647 PAK6Q9NQU5 681 aaPredicted RBP20.48■□□□□ 0.87
BRCC3-202ENST00000340647 COLQQ9Y215 455 aaPredicted RBP20.48■□□□□ 0.87
BRCC3-202ENST00000340647 TMX2Q9Y320 296 aa20.48■□□□□ 0.87
BRCC3-202ENST00000340647 CEP290O15078 2479 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 IGHDP01880 384 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 ZFYP08048 801 aaPredicted RBP20.47■□□□□ 0.87
BRCC3-202ENST00000340647 RASA1P20936 1047 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 ZMYM1Q5SVZ6 1142 aa20.47■□□□□ 0.87
BRCC3-202ENST00000340647 GIMAP6Q6P9H5 292 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms