RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TTC12Q9H892 705 aaPredicted RBP17.83■□□□□ 0.45
MBD1-203ENST00000339998 TTF2Q9UNY4 1162 aaKnown RBP17.83■□□□□ 0.45
MBD1-203ENST00000339998 RASA1P20936 1047 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 SLC35G1Q2M3R5 365 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 UVSSAQ2YD98 709 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 USP49Q70CQ1 688 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 ZSCAN30Q86W11 494 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 C2CD5Q86YS7 1000 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 CTCFLQ8NI51 663 aaPredicted RBP17.83■□□□□ 0.44
MBD1-203ENST00000339998 WASF1Q92558 559 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 MTA3Q9BTC8 594 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.44
MBD1-203ENST00000339998 DDX4Q9NQI0 724 aaKnown RBP17.83■□□□□ 0.44
MBD1-203ENST00000339998 CNTNAP5Q8WYK1 1306 aa17.83■□□□□ 0.44
MBD1-203ENST00000339998 MAST2Q6P0Q8 1798 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 ZNF444Q8N0Y2 327 aaPredicted RBP17.82■□□□□ 0.44
MBD1-203ENST00000339998 CDK8P49336 464 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
MBD1-203ENST00000339998 KAT14Q9H8E8 782 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 LAMB1P07942 1786 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 A0A1W2PQ27 194 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 A0A1W2PQ64 194 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 A0A1W2PQD8 194 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 G3V3G9 751 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 FOXN1O15353 648 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
MBD1-203ENST00000339998 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
MBD1-203ENST00000339998 C17orf53Q8N3J3 647 aaPredicted RBP17.81■□□□□ 0.44
MBD1-203ENST00000339998 PRPF3O43395 683 aaKnown RBP17.81■□□□□ 0.44
MBD1-203ENST00000339998 NPY5RQ15761 445 aa17.81■□□□□ 0.44
MBD1-203ENST00000339998 PDILTQ8N807 584 aa17.81■□□□□ 0.44
MBD1-203ENST00000339998 RASGRP4Q8TDF6 673 aa17.81■□□□□ 0.44
MBD1-203ENST00000339998 MASTLQ96GX5 879 aa17.81■□□□□ 0.44
MBD1-203ENST00000339998 CDK5RAP2Q96SN8 1893 aa17.81■□□□□ 0.44
MBD1-203ENST00000339998 CLCN1P35523 988 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 PDE6BP35913 854 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 KIAA0825Q8IV33 1275 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
MBD1-203ENST00000339998 ADAMTSL1Q8N6G6 1762 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 DDAH1O94760 285 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 PCP11498 1178 aaKnown RBP17.8■□□□□ 0.44
MBD1-203ENST00000339998 CMA1P23946 247 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 DPCR1Q3MIW9 517 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 DEFB132Q7Z7B7 95 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 TMEM47Q9BQJ4 181 aa17.8■□□□□ 0.44
MBD1-203ENST00000339998 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
MBD1-203ENST00000339998 TYW1BQ6NUM6 668 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 EYA3Q99504 573 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 FAM196BA6NMK8 535 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 ALDH1B1P30837 517 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 SYKP43405 635 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 NFIAQ12857 509 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 PNOCQ13519 176 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 LONRF3Q496Y0 759 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 FOXP1Q9H334 677 aaPredicted RBP17.79■□□□□ 0.44
MBD1-203ENST00000339998 LTBP1Q14766 1721 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 CYTH3O43739 400 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 ZNF174Q15697 407 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 AMOTL1Q8IY63 956 aa17.79■□□□□ 0.44
MBD1-203ENST00000339998 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
MBD1-203ENST00000339998 FAM205AQ6ZU69 1335 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 RCAN1P53805 252 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 IQCB1Q15051 598 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 SHROOM1Q2M3G4 852 aaPredicted RBP17.78■□□□□ 0.44
MBD1-203ENST00000339998 USP17L2Q6R6M4 530 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 GRAMD1CQ8IYS0 662 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 CEP95Q96GE4 821 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 RBM28Q9NW13 759 aaKnown RBP17.78■□□□□ 0.44
MBD1-203ENST00000339998 NAV1Q8NEY1 1877 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 GAKO14976 1311 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 TBC1D22AQ8WUA7 517 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 KIAA1468Q9P260 1216 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
MBD1-203ENST00000339998 TCP10Q12799 353 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 SLC15A2Q16348 729 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 PPP6R2O75170 966 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 CALM1P0DP23 149 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 CALM2P0DP24 149 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 CALM3P0DP25 149 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 KRT2P35908 639 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 PIK3AP1Q6ZUJ8 805 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.44
MBD1-203ENST00000339998 ZKSCAN5Q9Y2L8 839 aa17.77■□□□□ 0.44
MBD1-203ENST00000339998 SNED1Q8TER0 1413 aa17.77■□□□□ 0.43
MBD1-203ENST00000339998 SCG2P13521 617 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 NLRP5P59047 1200 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 STX1AQ16623 288 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 AOPEPQ8N6M6 819 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 TRIM5Q9C035 493 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 MYH1P12882 1939 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms