RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 FOXN1O15353 648 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 ORC4O43929 436 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 FGRP09769 529 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 PCP11498 1178 aaKnown RBP15.25■□□□□ 0.03
SRSF3-201ENST00000339436 HMGCS2P54868 508 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 BACE1P56817 501 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 ICA1Q05084 483 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 FASTKD5Q7L8L6 764 aaKnown RBP15.25■□□□□ 0.03
SRSF3-201ENST00000339436 STAG1Q8WVM7 1258 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 FEZ1Q99689 392 aa15.25■□□□□ 0.03
SRSF3-201ENST00000339436 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 ZNF213O14771 459 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 TRPA1O75762 1119 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 IMMTQ16891 758 aaKnown RBP15.24■□□□□ 0.03
SRSF3-201ENST00000339436 SH3D19Q5HYK7 790 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 AKNAD1Q5T1N1 836 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 GADL1Q6ZQY3 521 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 ANKRD23Q86SG2 305 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 ZNF444Q8N0Y2 327 aaPredicted RBP15.24■□□□□ 0.03
SRSF3-201ENST00000339436 PROCA1Q8NCQ7 364 aaPredicted RBP15.24■□□□□ 0.03
SRSF3-201ENST00000339436 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 CFHR5Q9BXR6 569 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 LSG1Q9H089 658 aaKnown RBP15.24■□□□□ 0.03
SRSF3-201ENST00000339436 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
SRSF3-201ENST00000339436 HTTP42858 3142 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 NEDD4P46934 1319 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 MGAMO43451 1857 aa15.24■□□□□ 0.03
SRSF3-201ENST00000339436 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 TSPY3P0CV98 308 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 TSPY8P0CW00 308 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 DGKZQ13574 1117 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 GPAT2Q6NUI2 795 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 KIAA1211Q6ZU35 1233 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 MAP4K1Q92918 833 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 KIAA1683Q9H0B3 1180 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
SRSF3-201ENST00000339436 KANSL2Q9H9L4 492 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 A0A0G2JMZ2 1700 aa15.23■□□□□ 0.03
SRSF3-201ENST00000339436 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 A0A1W2PRG0 241 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 HSPA8P11142 646 aaKnown RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 NEDD1Q8NHV4 660 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 C12orf42Q96LP6 360 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 TSPY2A6NKD2 308 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 PDHXO00330 501 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 RANBP6O60518 1105 aaKnown RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 CTCFP49711 727 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 USP14P54578 494 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 TFAP4Q01664 338 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 CRHR2Q13324 411 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 TAF1CQ15572 869 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 FAM47AQ5JRC9 791 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 USP17L2Q6R6M4 530 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 CEP95Q96GE4 821 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 TOMM22Q9NS69 142 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 TMOD4Q9NZQ9 345 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
SRSF3-201ENST00000339436 COL11A1P12107 1806 aaPredicted RBP15.22■□□□□ 0.03
SRSF3-201ENST00000339436 CENPFP49454 3210 aa15.21■□□□□ 0.03
SRSF3-201ENST00000339436 ZSWIM8A7E2V4 1837 aa15.21■□□□□ 0.03
SRSF3-201ENST00000339436 CYP21A2P08686 494 aa15.21■□□□□ 0.03
SRSF3-201ENST00000339436 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
SRSF3-201ENST00000339436 NT5C2P49902 561 aa15.21■□□□□ 0.03
SRSF3-201ENST00000339436 RRP12Q5JTH9 1297 aaKnown RBP15.21■□□□□ 0.03
SRSF3-201ENST00000339436 PARK7Q99497 189 aaKnown RBP15.21■□□□□ 0.03
SRSF3-201ENST00000339436 TMX2Q9Y320 296 aa15.21■□□□□ 0.03
SRSF3-201ENST00000339436 DOCK3Q8IZD9 2030 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 VCAM1P19320 739 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 R3HDMLQ9H3Y0 253 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 MTMR4Q9NYA4 1195 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 NYAP2Q9P242 653 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 ADGRA2Q96PE1 1338 aa15.2■□□□□ 0.02
SRSF3-201ENST00000339436 TTLL1O95922 423 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 ATP2B2Q01814 1243 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 NOM1Q5C9Z4 860 aaKnown RBP15.19■□□□□ 0.02
SRSF3-201ENST00000339436 NKX2-3Q8TAU0 364 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 LPAR1Q92633 364 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 ESR2Q92731 530 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 ZFYVE28Q9HCC9 887 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
SRSF3-201ENST00000339436 B4E1Z4 1266 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 NMT2O60551 498 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 LBX1P52954 281 aa15.18■□□□□ 0.02
SRSF3-201ENST00000339436 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms