RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CPLX2Q6PUV4 134 aaKnown RBP21.46■■□□□ 1.03
PSPC1-201ENST00000338910 ALG1Q9BT22 464 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 CLIC4Q9Y696 253 aa21.46■■□□□ 1.03
PSPC1-201ENST00000338910 CYP2D7A0A087X1C5 515 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 SEMA3EO15041 775 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 CDKL5O76039 1030 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 MECOMQ03112 1051 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 STK38Q15208 465 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 KIF28PB7ZC32 967 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 POLRMTO00411 1230 aaKnown RBP21.45■■□□□ 1.02
PSPC1-201ENST00000338910 YEATS4O95619 227 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 OAS2P29728 719 aaKnown RBP21.45■■□□□ 1.02
PSPC1-201ENST00000338910 NTRK3Q16288 839 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 NSUN4Q96CB9 384 aaKnown RBP21.45■■□□□ 1.02
PSPC1-201ENST00000338910 RNF41Q9H4P4 317 aaPredicted RBP21.45■■□□□ 1.02
PSPC1-201ENST00000338910 POLR3EQ9NVU0 708 aa21.45■■□□□ 1.02
PSPC1-201ENST00000338910 UBE2Q2LH0YL09 131 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 PLSCR1O15162 318 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 ZNF202O95125 648 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 PRDX5P30044 214 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
PSPC1-201ENST00000338910 WTAPQ15007 396 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 SART3Q15020 963 aaKnown RBP21.44■■□□□ 1.02
PSPC1-201ENST00000338910 SF3A1Q15459 793 aaKnown RBP21.44■■□□□ 1.02
PSPC1-201ENST00000338910 SYNE3Q6ZMZ3 975 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 FCHSD1Q86WN1 690 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 ZCCHC17Q9NP64 241 aaKnown RBP21.44■■□□□ 1.02
PSPC1-201ENST00000338910 IRS2Q9Y4H2 1338 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
PSPC1-201ENST00000338910 CACNA1SQ13698 1873 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 ERICH2A1L162 156 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 SPTLC2O15270 562 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 RANBP6O60518 1105 aaKnown RBP21.43■■□□□ 1.02
PSPC1-201ENST00000338910 GPR161Q8N6U8 529 aaKnown RBP21.43■■□□□ 1.02
PSPC1-201ENST00000338910 GPR101Q96P66 508 aaPredicted RBP21.43■■□□□ 1.02
PSPC1-201ENST00000338910 EPC1Q9H2F5 836 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 VWA3AA6NCI4 1184 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 RXRBP28702 533 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 KIF23Q02241 960 aaPredicted RBP21.43■■□□□ 1.02
PSPC1-201ENST00000338910 SMC1AQ14683 1233 aaKnown RBP21.43■■□□□ 1.02
PSPC1-201ENST00000338910 DPF2Q92785 391 aa21.43■■□□□ 1.02
PSPC1-201ENST00000338910 AATFQ9NY61 560 aaKnown RBP eCLIP21.43■■□□□ 1.029e-9■■□□□ 13.1
PSPC1-201ENST00000338910 XDHP47989 1333 aa21.42■■□□□ 1.02
PSPC1-201ENST00000338910 KRBA2Q6ZNG9 492 aa21.42■■□□□ 1.02
PSPC1-201ENST00000338910 CCDC82Q8N4S0 544 aa21.42■■□□□ 1.02
PSPC1-201ENST00000338910 SLC26A6Q9BXS9 759 aa21.42■■□□□ 1.02
PSPC1-201ENST00000338910 UBASH3AP57075 661 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 GPS2Q13227 327 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 KRT40Q6A162 431 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 COL23A1Q86Y22 540 aaPredicted RBP21.41■■□□□ 1.02
PSPC1-201ENST00000338910 UBAC1Q9BSL1 405 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 LEMD3Q9Y2U8 911 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 GOLGB1Q14789 3259 aaKnown RBP21.41■■□□□ 1.02
PSPC1-201ENST00000338910 MYH13Q9UKX3 1938 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 ZSCAN12O43309 604 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 PRDM1O75626 825 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 MAP3K9P80192 1104 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 AXDND1Q5T1B0 1012 aaPredicted RBP21.41■■□□□ 1.02
PSPC1-201ENST00000338910 BRAPQ7Z569 592 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 TMEM139Q8IV31 216 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 ANAPC4Q9UJX5 808 aa21.41■■□□□ 1.02
PSPC1-201ENST00000338910 CBFA2T2O43439 604 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 GPSM2P81274 684 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 RSRC2Q7L4I2 434 aaKnown RBP21.4■■□□□ 1.02
PSPC1-201ENST00000338910 VSTM4Q8IW00 320 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 CMTR1Q8N1G2 835 aaKnown RBP21.4■■□□□ 1.02
PSPC1-201ENST00000338910 NUP133Q8WUM0 1156 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 ESR2Q92731 530 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 AKT1S1Q96B36 256 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 RBM17Q96I25 401 aaKnown RBP21.4■■□□□ 1.02
PSPC1-201ENST00000338910 CHD4Q14839 1912 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 USP17L12C9JPN9 530 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 USP17L21D6R901 530 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 SSRP1Q08945 709 aaKnown RBP21.4■■□□□ 1.02
PSPC1-201ENST00000338910 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 BRIP1Q9BX63 1249 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 PPP2R2CQ9Y2T4 447 aa21.4■■□□□ 1.02
PSPC1-201ENST00000338910 PDS5AQ29RF7 1337 aaKnown RBP21.4■■□□□ 1.02
PSPC1-201ENST00000338910 PFKFB1P16118 471 aa21.39■■□□□ 1.02
PSPC1-201ENST00000338910 CMA1P23946 247 aa21.39■■□□□ 1.02
PSPC1-201ENST00000338910 EVX2Q03828 476 aa21.39■■□□□ 1.02
PSPC1-201ENST00000338910 MAPK8IP2Q13387 824 aaPredicted RBP21.39■■□□□ 1.02
PSPC1-201ENST00000338910 ZSCAN26Q16670 478 aa21.39■■□□□ 1.02
PSPC1-201ENST00000338910 TUBE1Q9UJT0 475 aa21.39■■□□□ 1.02
PSPC1-201ENST00000338910 ARHGAP6O43182 974 aa21.39■■□□□ 1.01
PSPC1-201ENST00000338910 TMTC2Q8N394 836 aa21.39■■□□□ 1.01
PSPC1-201ENST00000338910 FUT8Q9BYC5 575 aa21.39■■□□□ 1.01
PSPC1-201ENST00000338910 ARFGAP3Q9NP61 516 aa21.39■■□□□ 1.01
PSPC1-201ENST00000338910 HMGB2P26583 209 aaKnown RBP21.38■■□□□ 1.01
PSPC1-201ENST00000338910 MYL5Q02045 173 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 GOLGA8FQ08AF8 430 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 GOLGA8DPQ0D2H9 430 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 GNL2Q13823 731 aaKnown RBP21.38■■□□□ 1.01
PSPC1-201ENST00000338910 RTN1Q16799 776 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 ISM2Q6H9L7 571 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 CCDC34Q96HJ3 373 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 WDR24Q96S15 920 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 MRFAP1Q9Y605 127 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms