RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
SATB1-201ENST00000338745 RGS16O15492 202 aaPredicted RBP18.5■□□□□ 0.55
SATB1-201ENST00000338745 KRT71Q3SY84 523 aa18.5■□□□□ 0.55
SATB1-201ENST00000338745 ANKRD2Q9GZV1 360 aa18.5■□□□□ 0.55
SATB1-201ENST00000338745 CABP7Q86V35 215 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 PHACTR3Q96KR7 559 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 KRT12Q99456 494 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 TSKSQ9UJT2 592 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 EXOC7Q9UPT5 735 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 GPAA1O43292 621 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 BCRP11274 1271 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
SATB1-201ENST00000338745 NXNQ6DKJ4 435 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 SNX29Q8TEQ0 813 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 GOLGA8KD6RF30 607 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 MAGEA1P43355 309 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 TPX2Q9ULW0 747 aaKnown RBP18.49■□□□□ 0.55
SATB1-201ENST00000338745 POLR3AO14802 1390 aaPredicted RBP18.49■□□□□ 0.55
SATB1-201ENST00000338745 MAP7Q14244 749 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 RAB17Q9H0T7 212 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 CCDC117Q8IWD4 279 aaPredicted RBP18.49■□□□□ 0.55
SATB1-201ENST00000338745 HINFPQ9BQA5 517 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 ZC3H12CQ9C0D7 883 aaKnown RBP18.49■□□□□ 0.55
SATB1-201ENST00000338745 SAR1BQ9Y6B6 198 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
SATB1-201ENST00000338745 NPATQ14207 1427 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 CUL4BQ13620 913 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 KRT19P08727 400 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 STX2P32856 288 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 SYCP2Q9BX26 1530 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 ARHGAP42A6NI28 874 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.48■□□□□ 0.55
SATB1-201ENST00000338745 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 RSAD2Q8WXG1 361 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
SATB1-201ENST00000338745 CABLES1Q8TDN4 633 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 PARP2Q9UGN5 583 aa18.48■□□□□ 0.55
SATB1-201ENST00000338745 KCNK3O14649 394 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 BSPRYQ5W0U4 402 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
SATB1-201ENST00000338745 ADAT2Q7Z6V5 191 aaKnown RBP18.47■□□□□ 0.55
SATB1-201ENST00000338745 PALM2Q8IXS6 379 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 SRGAP1Q7Z6B7 1085 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
SATB1-201ENST00000338745 DNM3Q9UQ16 869 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 PLCH2O75038 1416 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 KCNJ18B7U540 433 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 MORC3Q14149 939 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 KCNJ12Q14500 433 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 SERTAD1Q9UHV2 236 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 DIS3L2Q8IYB7 885 aaKnown RBP18.47■□□□□ 0.55
SATB1-201ENST00000338745 CAPS2Q9BXY5 557 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 NLRC4Q9NPP4 1024 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 VPS54Q9P1Q0 977 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 AMFRQ9UKV5 643 aa18.47■□□□□ 0.55
SATB1-201ENST00000338745 FLOT1O75955 427 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 CAPN12Q6ZSI9 719 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 TMEM63CQ9P1W3 806 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 HERC4Q5GLZ8 1057 aaPredicted RBP18.46■□□□□ 0.55
SATB1-201ENST00000338745 RDH13Q8NBN7 331 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.55
SATB1-201ENST00000338745 U2AF1L4Q8WU68 220 aaKnown RBP18.46■□□□□ 0.55
SATB1-201ENST00000338745 GCKP35557 465 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 RASSF2P50749 326 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 TRPM2O94759 1503 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 ABCB4P21439 1286 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 LGSNQ5TDP6 509 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 CDAN1Q8IWY9 1227 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 PPP4R1Q8TF05 950 aa18.46■□□□□ 0.55
SATB1-201ENST00000338745 KRIT1O00522 736 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 ADCY7P51828 1080 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 ANKRD20A3Q5VUR7 823 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 CROCCP2Q86T23 111 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 MICAL1Q8TDZ2 1067 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 RTCBQ9Y3I0 505 aaKnown RBP18.45■□□□□ 0.54
SATB1-201ENST00000338745 TROVE2P10155 538 aaKnown RBP eCLIP18.45■□□□□ 0.54
SATB1-201ENST00000338745 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
SATB1-201ENST00000338745 DIXDC1Q155Q3 683 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 LRRC8AQ8IWT6 810 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 TPTE2Q6XPS3 522 aa18.45■□□□□ 0.54
SATB1-201ENST00000338745 BIN2Q9UBW5 565 aaPredicted RBP18.44■□□□□ 0.54
SATB1-201ENST00000338745 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 PRPF6O94906 941 aaKnown RBP18.44■□□□□ 0.54
SATB1-201ENST00000338745 RSPH3Q86UC2 560 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 EFCC1Q9HA90 598 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 TAF5LO75529 589 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 PRDM1O75626 825 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 ME3Q16798 604 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 ARHGEF10LQ9HCE6 1279 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 SEPT10Q9P0V9 454 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 USH1CQ9Y6N9 552 aa18.44■□□□□ 0.54
SATB1-201ENST00000338745 LIG3P49916 1009 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms