RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 METTL16Q86W50 562 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-201ENST00000338399 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-201ENST00000338399 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CALM1P0DP23 149 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CALM2P0DP24 149 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CALM3P0DP25 149 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PDCP20941 246 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 EPS15P42566 896 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TNNI2P48788 182 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 NTRK3Q16288 839 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CDAN1Q8IWY9 1227 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CDKL5O76039 1030 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 NFKBIBQ15653 356 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TRPM4Q8TD43 1214 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 GREB1LQ9C091 1923 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 ZSCAN22P10073 491 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 RASA3Q14644 834 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PHKBQ93100 1093 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MTMR4Q9NYA4 1195 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PGAP2Q9UHJ9 254 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MTMR6Q9Y217 621 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
CDK5RAP3-201ENST00000338399 IGKV6D-41A0A0C4DH26 115 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 GRIN3BO60391 1043 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 NOVP48745 357 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 FOSBP53539 338 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PPP2R5BQ15173 497 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 IFNAR1P17181 557 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 GDF11O95390 407 aa17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PDIA4P13667 645 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 SSRP1Q08945 709 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MYH6P13533 1939 aa17.17■□□□□ 0.34
CDK5RAP3-201ENST00000338399 H3BQV1 296 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 PLEKHA8P1O95397 391 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 IFFO2Q5TF58 517 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MIGA2Q7L4E1 593 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 FMNL1O95466 1100 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TTLL1O95922 423 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 F13A1P00488 732 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 NBPF11Q86T75 865 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
CDK5RAP3-201ENST00000338399 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TBC1D12O60347 775 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 BAG4O95429 457 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 NBR1Q14596 966 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 AIFM3Q96NN9 605 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 DEFB129Q9H1M3 183 aa17.15■□□□□ 0.34
CDK5RAP3-201ENST00000338399 STK36Q9NRP7 1315 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 KIF5BP33176 963 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 JAG1P78504 1218 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GRM4Q14833 912 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 SEPT2Q15019 361 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 TMEM179Q6ZVK1 233 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 TRIM22Q8IYM9 498 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GH2P01242 217 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GUCY1A2P33402 732 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 MCM4P33991 863 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms