RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TEX33O43247 280 aa18.74■□□□□ 0.59
CDC42EP4-201ENST00000335793 IQCA1Q86XH1 822 aa18.74■□□□□ 0.59
CDC42EP4-201ENST00000335793 KCND1Q9NSA2 647 aa18.74■□□□□ 0.59
CDC42EP4-201ENST00000335793 MAPK8IP1Q9UQF2 711 aa18.74■□□□□ 0.59
CDC42EP4-201ENST00000335793 MAGEB6P1A0A0J9YX57 407 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 GOLGA6L9A6NEM1 432 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 STX10O60499 249 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 PNMA6AP0CW24 399 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 KCNJ6P48051 423 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 BICDL1Q6ZP65 573 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 ENOX1Q8TC92 643 aaKnown RBP18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 BLZF1Q9H2G9 400 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 RRP15Q9Y3B9 282 aaKnown RBP18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 TACC3Q9Y6A5 838 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 ZNF142P52746 1687 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 SOWAHDA6NJG2 315 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 CCDC175P0C221 793 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 GYG1P46976 350 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 PLA2G4AP47712 749 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 KIF4BQ2VIQ3 1234 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 CCDC152Q4G0S7 254 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 KRT2P35908 639 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 ALX1Q15699 326 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 CCDC93Q567U6 631 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 ZNF512BQ96KM6 892 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 DEF6Q9H4E7 631 aa18.73■□□□□ 0.59
CDC42EP4-201ENST00000335793 TRPM3Q9HCF6 1732 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 BAZ2BQ9UIF8 2168 aaKnown RBP18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 TXLNBQ8N3L3 684 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 TC2NQ8N9U0 490 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 FHOD1Q9Y613 1164 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 EFCAB8A8MWE9 144 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 SYMPKQ92797 1274 aaKnown RBP18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 SLC4A9Q96Q91 983 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 PARP3Q9Y6F1 533 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 CAMTA1Q9Y6Y1 1673 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 STRCQ7RTU9 1775 aa18.72■□□□□ 0.59
CDC42EP4-201ENST00000335793 N4BP3O15049 544 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 KIF5CO60282 957 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 H2AFXP16104 143 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 GUCY2CP25092 1073 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 NLRP5P59047 1200 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 TTC31Q49AM3 519 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 PACS2Q86VP3 889 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 VPS16Q9H269 839 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 STK36Q9NRP7 1315 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 PLCD1P51178 756 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 RRAGBQ5VZM2 374 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 STAG1Q8WVM7 1258 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 ZNF622Q969S3 477 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 ARFGAP3Q9NP61 516 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 CEP83Q9Y592 693 aa18.71■□□□□ 0.59
CDC42EP4-201ENST00000335793 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.58
CDC42EP4-201ENST00000335793 SYNRGQ9UMZ2 1314 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 MCM7P33993 719 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 RBL2Q08999 1139 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 MORC3Q14149 939 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 ZNF569Q5MCW4 686 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 JAG2Q9Y219 1238 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 TADA3O75528 432 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 PLEKHA8P1O95397 391 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 CHRNDQ07001 517 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 GPS2Q13227 327 aa18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
CDC42EP4-201ENST00000335793 MYO1BO43795 1136 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 ANKRD20A12PQ8NF67 263 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 CTCFLQ8NI51 663 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 PLEKHA4Q9H4M7 779 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 FCHSD1Q86WN1 690 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 KIF1AQ12756 1690 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 CCDC172P0C7W6 258 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 CDC25AP30304 524 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
CDC42EP4-201ENST00000335793 FGFR2P21802 821 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 OAS2P29728 719 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 CASP14P31944 242 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 PTGDRQ13258 359 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 EARS2Q5JPH6 523 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 FAM47AQ5JRC9 791 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 TRIML1Q8N9V2 468 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 ABCC6O95255 1503 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 WTIPA6NIX2 430 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 FANCGO15287 622 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 ACTN4O43707 911 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 IL6STP40189 918 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 MCM6Q14566 821 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 CAVIN4Q5BKX8 364 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 SPATA1Q5VX52 437 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 GOLGA1Q92805 767 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 PAGE5Q96GU1 130 aa18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 MRPL44Q9H9J2 332 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms