RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CFAP100Q494V2 611 aa23.43■■□□□ 1.34
LINC01006-201ENST00000333319 TMTC3Q6ZXV5 915 aa23.43■■□□□ 1.34
LINC01006-201ENST00000333319 NT5DC1Q5TFE4 455 aa23.43■■□□□ 1.34
LINC01006-201ENST00000333319 SMARCE1Q969G3 411 aa23.43■■□□□ 1.34
LINC01006-201ENST00000333319 RTCBQ9Y3I0 505 aaKnown RBP23.43■■□□□ 1.34
LINC01006-201ENST00000333319 DLEC1Q9Y238 1755 aa23.43■■□□□ 1.34
LINC01006-201ENST00000333319 TM4SF1P30408 202 aa23.42■■□□□ 1.34
LINC01006-201ENST00000333319 DHX8Q14562 1220 aaKnown RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
LINC01006-201ENST00000333319 UBE2Q2Q8WVN8 375 aa23.42■■□□□ 1.34
LINC01006-201ENST00000333319 CCNL1Q9UK58 526 aaPredicted RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 ACTN4O43707 911 aaKnown RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 SARSP49591 514 aaKnown RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 E4F1Q66K89 784 aaPredicted RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 SRBD1Q8N5C6 995 aaKnown RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 CTCFLQ8NI51 663 aaPredicted RBP23.42■■□□□ 1.34
LINC01006-201ENST00000333319 BAZ2BQ9UIF8 2168 aaKnown RBP23.41■■□□□ 1.34
LINC01006-201ENST00000333319 NPHP1O15259 732 aa23.41■■□□□ 1.34
LINC01006-201ENST00000333319 KANK3Q6NY19 840 aa23.41■■□□□ 1.34
LINC01006-201ENST00000333319 ARHGEF1Q92888 912 aaKnown RBP23.41■■□□□ 1.34
LINC01006-201ENST00000333319 BRMS1Q9HCU9 246 aa23.41■■□□□ 1.34
LINC01006-201ENST00000333319 ARPP21Q9UBL0 812 aaPredicted RBP23.41■■□□□ 1.34
LINC01006-201ENST00000333319 COL24A1Q17RW2 1714 aa23.41■■□□□ 1.34
LINC01006-201ENST00000333319 CNTNAP5Q8WYK1 1306 aa23.41■■□□□ 1.34
LINC01006-201ENST00000333319 MYO1BO43795 1136 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 NRDCO43847 1150 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 TOM1O60784 492 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 ZNF827Q17R98 1081 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 FAM182BQ5T319 152 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 SLC4A8Q2Y0W8 1093 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 HSP90AA4PQ58FG1 418 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 ANKRD7Q92527 254 aa23.4■■□□□ 1.34
LINC01006-201ENST00000333319 TSPY2A6NKD2 308 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 WNT7AO00755 349 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 MORC3Q14149 939 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 NPY5RQ15761 445 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 SBK1Q52WX2 424 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 NOM1Q5C9Z4 860 aaKnown RBP23.39■■□□□ 1.34
LINC01006-201ENST00000333319 DZIP1Q86YF9 867 aaKnown RBP23.39■■□□□ 1.34
LINC01006-201ENST00000333319 MLKLQ8NB16 471 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 EPSTI1Q96J88 318 aa23.39■■□□□ 1.34
LINC01006-201ENST00000333319 NOL10Q9BSC4 688 aaKnown RBP23.39■■□□□ 1.34
LINC01006-201ENST00000333319 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.33
LINC01006-201ENST00000333319 FMR1Q06787 632 aaKnown RBP eCLIP23.39■■□□□ 1.33
LINC01006-201ENST00000333319 DHX58Q96C10 678 aa23.39■■□□□ 1.33
LINC01006-201ENST00000333319 MCM9Q9NXL9 1143 aa23.39■■□□□ 1.33
LINC01006-201ENST00000333319 MORC2Q9Y6X9 1032 aaPredicted RBP23.39■■□□□ 1.33
LINC01006-201ENST00000333319 BTAF1O14981 1849 aa23.39■■□□□ 1.33
LINC01006-201ENST00000333319 TMEM232C9JQI7 657 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 ZNF174Q15697 407 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 PTPN21Q16825 1174 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 VSTM4Q8IW00 320 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 TNFRSF25Q93038 417 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 DACH1Q9UI36 760 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 LAMB1P07942 1786 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 A0A087X0B3 334 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 TRIML1Q8N9V2 468 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 NFE2L3Q9Y4A8 694 aa23.38■■□□□ 1.33
LINC01006-201ENST00000333319 IRS2Q9Y4H2 1338 aa23.37■■□□□ 1.33
LINC01006-201ENST00000333319 USP17L8P0C7I0 530 aa23.37■■□□□ 1.33
LINC01006-201ENST00000333319 NCBP1Q09161 790 aaKnown RBP23.37■■□□□ 1.33
LINC01006-201ENST00000333319 SPTY2D1Q68D10 685 aaPredicted RBP23.37■■□□□ 1.33
LINC01006-201ENST00000333319 PPP1R13BQ96KQ4 1090 aa23.37■■□□□ 1.33
LINC01006-201ENST00000333319 ANKIB1Q9P2G1 1089 aa23.37■■□□□ 1.33
LINC01006-201ENST00000333319 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
LINC01006-201ENST00000333319 BMP15O95972 392 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 TOP1P11387 765 aaKnown RBP23.36■■□□□ 1.33
LINC01006-201ENST00000333319 KCNJ6P48051 423 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 SLC51AQ86UW1 340 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 TRMT44Q8IYL2 757 aaKnown RBP23.36■■□□□ 1.33
LINC01006-201ENST00000333319 PDCL2Q8N4E4 241 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 SPATA20Q8TB22 786 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 SYMPKQ92797 1274 aaKnown RBP23.36■■□□□ 1.33
LINC01006-201ENST00000333319 TTC38Q5R3I4 469 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 KIF18AQ8NI77 898 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 ENOX1Q8TC92 643 aaKnown RBP23.36■■□□□ 1.33
LINC01006-201ENST00000333319 FERMT2Q96AC1 680 aa23.36■■□□□ 1.33
LINC01006-201ENST00000333319 CCDC94Q9BW85 323 aaPredicted RBP23.36■■□□□ 1.33
LINC01006-201ENST00000333319 KIAA1551Q9HCM1 1747 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 KIF2AO00139 706 aaPredicted RBP23.35■■□□□ 1.33
LINC01006-201ENST00000333319 SCG2P13521 617 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 CDK11BP21127 795 aaKnown RBP23.35■■□□□ 1.33
LINC01006-201ENST00000333319 AFMP43652 599 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 NLRP5P59047 1200 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 INTS13Q9NVM9 706 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 MAST2Q6P0Q8 1798 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 NAA30Q147X3 362 aaPredicted RBP23.35■■□□□ 1.33
LINC01006-201ENST00000333319 SYCP1Q15431 976 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 RCSD1Q6JBY9 416 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 TMED8Q6PL24 325 aaPredicted RBP23.35■■□□□ 1.33
LINC01006-201ENST00000333319 CCDC34Q96HJ3 373 aa23.35■■□□□ 1.33
LINC01006-201ENST00000333319 SLFN14P0C7P3 912 aa23.34■■□□□ 1.33
LINC01006-201ENST00000333319 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
LINC01006-201ENST00000333319 BCL11BQ9C0K0 894 aaPredicted RBP23.34■■□□□ 1.33
LINC01006-201ENST00000333319 LDHBP07195 334 aaKnown RBP23.34■■□□□ 1.33
LINC01006-201ENST00000333319 ZNF18P17022 549 aa23.34■■□□□ 1.33
LINC01006-201ENST00000333319 RFC4P35249 363 aa23.34■■□□□ 1.33
LINC01006-201ENST00000333319 USP5P45974 858 aa23.34■■□□□ 1.33
LINC01006-201ENST00000333319 GOLGA8FQ08AF8 430 aa23.34■■□□□ 1.33
LINC01006-201ENST00000333319 GOLGA8DPQ0D2H9 430 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms