RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 USP14P54578 494 aa22.54■■□□□ 1.2
MRPL54-201ENST00000330133 PABPC4Q13310 644 aaKnown RBP eCLIP22.54■■□□□ 1.23e-7■■■■■ 28.5
MRPL54-201ENST00000330133 LAMB1P07942 1786 aa22.53■■□□□ 1.2
MRPL54-201ENST00000330133 COL13A1Q5TAT6 717 aaPredicted RBP22.53■■□□□ 1.2
MRPL54-201ENST00000330133 ACER1Q8TDN7 264 aa22.53■■□□□ 1.2
MRPL54-201ENST00000330133 ZNF296Q8WUU4 475 aaPredicted RBP22.53■■□□□ 1.2
MRPL54-201ENST00000330133 PARK7Q99497 189 aaKnown RBP22.53■■□□□ 1.2
MRPL54-201ENST00000330133 ANAPC4Q9UJX5 808 aa22.53■■□□□ 1.2
MRPL54-201ENST00000330133 RAD50Q92878 1312 aa22.53■■□□□ 1.2
MRPL54-201ENST00000330133 PRDM1O75626 825 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 CTDSPL2Q05D32 466 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 BMP2KLQ5H9B9 411 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 TREML2Q5T2D2 321 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 KIAA1683Q9H0B3 1180 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 KANSL2Q9H9L4 492 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 ARHGEF10LQ9HCE6 1279 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 ZMYM6O95789 1325 aa22.52■■□□□ 1.2
MRPL54-201ENST00000330133 TLR2O60603 784 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 OSBPP22059 807 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 ICA1Q05084 483 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 DGKZQ13574 1117 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 ZYXQ15942 572 aaKnown RBP22.51■■□□□ 1.19
MRPL54-201ENST00000330133 DSCC1Q9BVC3 393 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 EMILIN3Q9NT22 766 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 PNMA3Q9UL41 463 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 ATAD5Q96QE3 1844 aa22.51■■□□□ 1.19
MRPL54-201ENST00000330133 PHIPQ8WWQ0 1821 aa22.5■■□□□ 1.19
MRPL54-201ENST00000330133 SH2D4AQ9H788 454 aa22.5■■□□□ 1.19
MRPL54-201ENST00000330133 CTNNA3Q9UI47 895 aa22.5■■□□□ 1.19
MRPL54-201ENST00000330133 CYP2C8P10632 490 aa22.49■■□□□ 1.19
MRPL54-201ENST00000330133 ATP2B2Q01814 1243 aa22.49■■□□□ 1.19
MRPL54-201ENST00000330133 SP3Q02447 781 aa22.49■■□□□ 1.19
MRPL54-201ENST00000330133 A0A1W2PRG0 241 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 ZNF213O14771 459 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 TSPY3P0CV98 308 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 TSPY8P0CW00 308 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 HAND2P61296 217 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
MRPL54-201ENST00000330133 ERO1AQ96HE7 468 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 C12orf42Q96LP6 360 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 IL25Q9H293 177 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 TOMM22Q9NS69 142 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 CPA4Q9UI42 421 aa22.48■■□□□ 1.19
MRPL54-201ENST00000330133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.48■■□□□ 1.19
MRPL54-201ENST00000330133 SGSM2O43147 1006 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 EEF2P13639 858 aaKnown RBP22.47■■□□□ 1.19
MRPL54-201ENST00000330133 HOXA7P31268 230 aaPredicted RBP22.47■■□□□ 1.19
MRPL54-201ENST00000330133 IRX3P78415 501 aaPredicted RBP22.47■■□□□ 1.19
MRPL54-201ENST00000330133 TFAP4Q01664 338 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 FAM47AQ5JRC9 791 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 C17orf99Q6UX52 265 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 CLEC10AQ8IUN9 316 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 SIAH1Q8IUQ4 282 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
MRPL54-201ENST00000330133 INCENPQ9NQS7 918 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 TMX2Q9Y320 296 aa22.47■■□□□ 1.19
MRPL54-201ENST00000330133 ORC4O43929 436 aa22.46■■□□□ 1.19
MRPL54-201ENST00000330133 NEDD1Q8NHV4 660 aa22.46■■□□□ 1.19
MRPL54-201ENST00000330133 ASCC2Q9H1I8 757 aaPredicted RBP22.46■■□□□ 1.19
MRPL54-201ENST00000330133 RNF41Q9H4P4 317 aaPredicted RBP22.46■■□□□ 1.19
MRPL54-201ENST00000330133 NYAP2Q9P242 653 aa22.46■■□□□ 1.19
MRPL54-201ENST00000330133 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L15C9J2P7 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L13C9JLJ4 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L11C9JVI0 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L18D6R9N7 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L22D6RA61 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L17D6RBQ6 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L19D6RCP7 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L20D6RJB6 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 RANBP6O60518 1105 aaKnown RBP22.45■■□□□ 1.18
MRPL54-201ENST00000330133 PCP11498 1178 aaKnown RBP22.45■■□□□ 1.18
MRPL54-201ENST00000330133 USP17L24Q0WX57 530 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 KIF22Q14807 665 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 ARHGEF6Q15052 776 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 IMMTQ16891 758 aaKnown RBP22.45■■□□□ 1.18
MRPL54-201ENST00000330133 RRP12Q5JTH9 1297 aaKnown RBP22.45■■□□□ 1.18
MRPL54-201ENST00000330133 AKNAD1Q5T1N1 836 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 MFSD6Q6ZSS7 791 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 CTU1Q7Z7A3 348 aaKnown RBP22.45■■□□□ 1.18
MRPL54-201ENST00000330133 TNS4Q8IZW8 715 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 ADGRA2Q96PE1 1338 aa22.45■■□□□ 1.18
MRPL54-201ENST00000330133 IGKV6D-41A0A0C4DH26 115 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 FGRP09769 529 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 GCLCP48506 637 aaPredicted RBP22.44■■□□□ 1.18
MRPL54-201ENST00000330133 PPP4R3BQ5MIZ7 849 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 CASC1Q6TDU7 716 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 KIAA1211Q6ZU35 1233 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 LPAR1Q92633 364 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 VCPKMTQ9H867 229 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 GOPCQ9HD26 462 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 CLIP2Q9UDT6 1046 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
MRPL54-201ENST00000330133 VCAM1P19320 739 aa22.43■■□□□ 1.18
MRPL54-201ENST00000330133 STAG1Q8WVM7 1258 aa22.43■■□□□ 1.18
MRPL54-201ENST00000330133 P2RX7Q99572 595 aaKnown RBP22.43■■□□□ 1.18
MRPL54-201ENST00000330133 RPAP3Q9H6T3 665 aaPredicted RBP22.43■■□□□ 1.18
MRPL54-201ENST00000330133 MTMR4Q9NYA4 1195 aa22.43■■□□□ 1.18
MRPL54-201ENST00000330133 U3KPZ7 1027 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms