RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 UFL1O94874 794 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 PTPROQ16827 1216 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 OTUD6BQ8N6M0 293 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 CALML4Q96GE6 196 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 EPSTI1Q96J88 318 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 SLF1Q9BQI6 1058 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 ATG3Q9NT62 314 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 KIF28PB7ZC32 967 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
VARS2-201ENST00000321897 TCP10Q12799 353 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 LONRF2Q1L5Z9 754 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 AFAP1L1Q8TED9 768 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 VWDEQ8N2E2 1590 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 ZMYND10O75800 440 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 TMEM51Q9NW97 253 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 RTEL1Q9NZ71 1219 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 IMPACTQ9P2X3 320 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 GOLGA6L7A0A1B0GV03 622 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 DIXDC1Q155Q3 683 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 SAMSN1Q9NSI8 373 aaKnown RBP17.16■□□□□ 0.34
VARS2-201ENST00000321897 KCNQ2O43526 872 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 CMA1P23946 247 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 GPR161Q8N6U8 529 aaKnown RBP17.16■□□□□ 0.34
VARS2-201ENST00000321897 TMEM87AQ8NBN3 555 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 NEDD4P46934 1319 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 PARD6BQ9BYG5 372 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 ZNF287Q9HBT7 754 aa17.16■□□□□ 0.34
VARS2-201ENST00000321897 EFCAB8A8MWE9 144 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 AKR1B15C9JRZ8 316 aaPredicted RBP17.15■□□□□ 0.34
VARS2-201ENST00000321897 GUCY1A2P33402 732 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 PTGDRQ13258 359 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 SLC39A14Q15043 492 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 ERFEQ4G0M1 354 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 IQCEQ6IPM2 695 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 RGS22Q8NE09 1264 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 OXER1Q8TDS5 423 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 KRT9P35527 623 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 PAFAH1B1P43034 410 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 INF2Q27J81 1249 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
VARS2-201ENST00000321897 PSMA7O14818 248 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 LDHCP07864 332 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
VARS2-201ENST00000321897 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 SCLT1Q96NL6 688 aa17.15■□□□□ 0.34
VARS2-201ENST00000321897 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
VARS2-201ENST00000321897 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 CCNT1O60563 726 aaKnown RBP17.14■□□□□ 0.33
VARS2-201ENST00000321897 TUBB4AP04350 444 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 MROH5Q6ZUA9 1318 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 CYP2D6P10635 497 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 PKD2L1Q9P0L9 805 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 ADAM21Q9UKJ8 722 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 PPLO60437 1756 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 SPATA31A3Q5VYP0 1347 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 PLS1Q14651 629 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 PPM1EQ8WY54 764 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.33
VARS2-201ENST00000321897 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
VARS2-201ENST00000321897 NDUFAB1O14561 156 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 STRBPQ96SI9 672 aaKnown RBP17.13■□□□□ 0.33
VARS2-201ENST00000321897 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
VARS2-201ENST00000321897 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
VARS2-201ENST00000321897 SYCP1Q15431 976 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 GBP6Q6ZN66 633 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 SYMPKQ92797 1274 aaKnown RBP17.13■□□□□ 0.33
VARS2-201ENST00000321897 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
VARS2-201ENST00000321897 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 TMCO5BA8MYB1 307 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
VARS2-201ENST00000321897 ZYXQ15942 572 aaKnown RBP17.13■□□□□ 0.33
VARS2-201ENST00000321897 PLA2G4DQ86XP0 818 aa17.13■□□□□ 0.33
VARS2-201ENST00000321897 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 IFT81Q8WYA0 676 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 FRMPD2Q68DX3 1309 aaPredicted RBP17.12■□□□□ 0.33
VARS2-201ENST00000321897 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 SH2B2O14492 632 aaPredicted RBP17.12■□□□□ 0.33
VARS2-201ENST00000321897 ACTN2P35609 894 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 PDE4DQ08499 809 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 UBE3CQ15386 1083 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
VARS2-201ENST00000321897 JRKLQ9Y4A0 524 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 CALM1P0DP23 149 aa17.12■□□□□ 0.33
VARS2-201ENST00000321897 CALM2P0DP24 149 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms