RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 SALL3Q9BXA9 1300 aa25.6■■□□□ 1.69
UBE2D3-201ENST00000321805 CYP2D6P10635 497 aa25.59■■□□□ 1.69
UBE2D3-201ENST00000321805 GUCY1A2P33402 732 aa25.59■■□□□ 1.69
UBE2D3-201ENST00000321805 HERVK_113P62684 666 aa25.59■■□□□ 1.69
UBE2D3-201ENST00000321805 CCDC17Q96LX7 622 aa25.59■■□□□ 1.69
UBE2D3-201ENST00000321805 STRBPQ96SI9 672 aaKnown RBP25.59■■□□□ 1.69
UBE2D3-201ENST00000321805 USP17L12C9JPN9 530 aa25.58■■□□□ 1.69
UBE2D3-201ENST00000321805 USP17L21D6R901 530 aa25.58■■□□□ 1.69
UBE2D3-201ENST00000321805 GNAT2P19087 354 aa25.58■■□□□ 1.69
UBE2D3-201ENST00000321805 C16orf86Q6ZW13 317 aa25.58■■□□□ 1.69
UBE2D3-201ENST00000321805 PXYLP1Q8TE99 480 aa25.58■■□□□ 1.69
UBE2D3-201ENST00000321805 USP17L15C9J2P7 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L13C9JLJ4 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L11C9JVI0 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L18D6R9N7 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L22D6RA61 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L17D6RBQ6 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L19D6RCP7 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L20D6RJB6 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 FLT3LGP49771 235 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 EVX2Q03828 476 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 USP17L24Q0WX57 530 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 SEPT2Q15019 361 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 ANKRD45Q5TZF3 282 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 SLC44A5Q8NCS7 719 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 OTUD7AQ8TE49 926 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 OSBP2Q969R2 916 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 P2RX7Q99572 595 aaKnown RBP25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 GABRQQ9UN88 632 aa25.57■■□□□ 1.68
UBE2D3-201ENST00000321805 DOCK3Q8IZD9 2030 aa25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 MPHOSPH10O00566 681 aaKnown RBP25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 UBXN2AP68543 259 aa25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 SBK1Q52WX2 424 aa25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 CTR9Q6PD62 1173 aa25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 ACER1Q8TDN7 264 aa25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 DYNLL2Q96FJ2 89 aa25.56■■□□□ 1.68
UBE2D3-201ENST00000321805 GPAA1O43292 621 aa25.55■■□□□ 1.68
UBE2D3-201ENST00000321805 VCAM1P19320 739 aa25.55■■□□□ 1.68
UBE2D3-201ENST00000321805 CDK8P49336 464 aa25.55■■□□□ 1.68
UBE2D3-201ENST00000321805 GPRC5AQ8NFJ5 357 aa25.55■■□□□ 1.68
UBE2D3-201ENST00000321805 GSG1L2A8MUP6 293 aa25.54■■□□□ 1.68
UBE2D3-201ENST00000321805 ZYXQ15942 572 aaKnown RBP25.54■■□□□ 1.68
UBE2D3-201ENST00000321805 FSD1Q9BTV5 496 aa25.54■■□□□ 1.68
UBE2D3-201ENST00000321805 SH2D4AQ9H788 454 aa25.54■■□□□ 1.68
UBE2D3-201ENST00000321805 STAP2Q9UGK3 403 aa25.54■■□□□ 1.68
UBE2D3-201ENST00000321805 ROBO3Q96MS0 1386 aa25.54■■□□□ 1.68
UBE2D3-201ENST00000321805 ADCY3O60266 1144 aa25.53■■□□□ 1.68
UBE2D3-201ENST00000321805 LBX2Q6XYB7 198 aa25.53■■□□□ 1.68
UBE2D3-201ENST00000321805 CATSPERGQ6ZRH7 1159 aa25.53■■□□□ 1.68
UBE2D3-201ENST00000321805 RWDD1Q9H446 243 aaPredicted RBP25.53■■□□□ 1.68
UBE2D3-201ENST00000321805 ARHGEF10LQ9HCE6 1279 aa25.53■■□□□ 1.68
UBE2D3-201ENST00000321805 CYP2D7A0A087X1C5 515 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 AKR1B1P15121 316 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 EN2P19622 333 aaPredicted RBP25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 ERVK-9P63128 1117 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 ERVK-24P63145 666 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 TICAM2Q86XR7 235 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 NKX2-3Q8TAU0 364 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 LPAR1Q92633 364 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 TXNRD2Q9NNW7 524 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 RBPJLQ9UBG7 517 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 RABGAP1Q9Y3P9 1069 aa25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 MKI67P46013 3256 aaKnown RBP25.52■■□□□ 1.68
UBE2D3-201ENST00000321805 A0A1W2PRG0 241 aa25.51■■□□□ 1.67
UBE2D3-201ENST00000321805 MAPK4P31152 587 aa25.51■■□□□ 1.67
UBE2D3-201ENST00000321805 ICA1Q05084 483 aa25.51■■□□□ 1.67
UBE2D3-201ENST00000321805 SMC5Q8IY18 1101 aa25.51■■□□□ 1.67
UBE2D3-201ENST00000321805 SOCS4Q8WXH5 440 aa25.51■■□□□ 1.67
UBE2D3-201ENST00000321805 BIN2Q9UBW5 565 aaPredicted RBP25.51■■□□□ 1.67
UBE2D3-201ENST00000321805 M0R2C6 588 aa25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 CAPN2P17655 700 aa25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 PDE1AP54750 535 aa25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 MTFR1Q15390 333 aa25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 ZMYM1Q5SVZ6 1142 aa25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 RPAP3Q9H6T3 665 aaPredicted RBP25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 TMX2Q9Y320 296 aa25.5■■□□□ 1.67
UBE2D3-201ENST00000321805 GJB1P08034 283 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 CCNA1P78396 465 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 EVI5LQ96CN4 794 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 NACAP1Q9BZK3 213 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 KANSL2Q9H9L4 492 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 ZNF287Q9HBT7 754 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 GJD2Q9UKL4 321 aa25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 GREB1LQ9C091 1923 aaPredicted RBP25.49■■□□□ 1.67
UBE2D3-201ENST00000321805 PATL2C9JE40 543 aaKnown RBP25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 SMIM22K7EJ46 135 aa25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 MYCP01106 439 aaPredicted RBP25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 CCL5P13501 91 aa25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 TDO2P48775 406 aa25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 PAGR1Q9BTK6 254 aa25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 EPB41L4AQ9HCS5 686 aaPredicted RBP25.48■■□□□ 1.67
UBE2D3-201ENST00000321805 PLXNB2O15031 1838 aa25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 INHAP05111 366 aa25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 ELNP15502 786 aa25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 PRPF38BQ5VTL8 546 aaKnown RBP25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 CCAR1Q8IX12 1150 aaKnown RBP25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 NUDT12Q9BQG2 462 aa25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 RNF208Q9H0X6 261 aa25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 VCPKMTQ9H867 229 aa25.47■■□□□ 1.67
UBE2D3-201ENST00000321805 SPDYE16A6NNV3 312 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 383.9 ms