RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TSPY8P0CW00 308 aa18.44■□□□□ 0.54
SFXN1-201ENST00000321442 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
SFXN1-201ENST00000321442 TUBB4BP68371 445 aa18.44■□□□□ 0.54
SFXN1-201ENST00000321442 IQGAP1P46940 1657 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
SFXN1-201ENST00000321442 GOLGA6CA6NDK9 693 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 GOLGA6DP0CG33 693 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 CDC25BP30305 580 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 HNRNPH2P55795 449 aaKnown RBP18.43■□□□□ 0.54
SFXN1-201ENST00000321442 SEPT7Q16181 437 aaKnown RBP18.43■□□□□ 0.54
SFXN1-201ENST00000321442 CFAP58Q5T655 872 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 WWC2Q6AWC2 1192 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 GRAMD1CQ8IYS0 662 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 VEZTQ9HBM0 779 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 GOLGA6AQ9NYA3 693 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 HPDP32754 393 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-201ENST00000321442 IRX3P78415 501 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-201ENST00000321442 SF3A3Q12874 501 aaKnown RBP eCLIP18.43■□□□□ 0.542e-12■■■□□ 17.3
SFXN1-201ENST00000321442 CARMIL3Q8ND23 1372 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 A0A1W2PQ27 194 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 A0A1W2PQ64 194 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 A0A1W2PQD8 194 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 LDHCP07864 332 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 CHRNDQ07001 517 aa18.43■□□□□ 0.54
SFXN1-201ENST00000321442 SND1Q7KZF4 910 aaKnown RBP eCLIP18.43■□□□□ 0.54
SFXN1-201ENST00000321442 TLDC2A0PJX2 215 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 ST7Q9NRC1 585 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 ANKRD62A6NC57 917 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 GSTTP1A0A1W2PQM5 241 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 ANKRD65E5RJM6 399 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 LONRF2Q1L5Z9 754 aa18.42■□□□□ 0.54
SFXN1-201ENST00000321442 SMIM23A6NLE4 172 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 ZSCAN20P17040 1043 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-201ENST00000321442 TCP10Q12799 353 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 PAK1Q13153 545 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 CSGALNACT2Q8N6G5 542 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 ZNF287Q9HBT7 754 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 ZC3H13Q5T200 1668 aaKnown RBP18.41■□□□□ 0.54
SFXN1-201ENST00000321442 NCOA3Q9Y6Q9 1424 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 IL6STP40189 918 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-201ENST00000321442 SMYD4Q8IYR2 804 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-201ENST00000321442 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
SFXN1-201ENST00000321442 CRB1P82279 1406 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 ZBTB22O15209 634 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 PPP1R12BO60237 982 aaPredicted RBP18.41■□□□□ 0.54
SFXN1-201ENST00000321442 NAPAP54920 295 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 JAKMIP2Q96AA8 810 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 PDE8BO95263 885 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 BRD3Q15059 726 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 ZNF804AQ7Z570 1209 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 DIP2AQ14689 1571 aa18.41■□□□□ 0.54
SFXN1-201ENST00000321442 ENC1O14682 589 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 ZMYND10O75800 440 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 PLA2G4DQ86XP0 818 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 PARD6BQ9BYG5 372 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 GOLPH3LQ9H4A5 285 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 GOLGA6BA6NDN3 693 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 STX10O60499 249 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 TTC38Q5R3I4 469 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 ZNF710Q8N1W2 664 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 CTNNBL1Q8WYA6 563 aaPredicted RBP18.4■□□□□ 0.54
SFXN1-201ENST00000321442 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
SFXN1-201ENST00000321442 LETM2Q2VYF4 491 aa18.39■□□□□ 0.54
SFXN1-201ENST00000321442 FAM47AQ5JRC9 791 aa18.39■□□□□ 0.54
SFXN1-201ENST00000321442 MAST3O60307 1309 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 GOLGA6L10A0A0M3HER8 536 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 RGS22Q8NE09 1264 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 RABGGTAQ92696 567 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-201ENST00000321442 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-201ENST00000321442 CASP14P31944 242 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 PDE4DQ08499 809 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 CERS3Q8IU89 383 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 SLC35F6Q8N357 371 aa18.39■□□□□ 0.53
SFXN1-201ENST00000321442 SAMSN1Q9NSI8 373 aaKnown RBP18.39■□□□□ 0.53
SFXN1-201ENST00000321442 AFF2P51816 1311 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 FAM170AA1A519 330 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 CALML3P27482 149 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 GTF2IP78347 998 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 CCDC114Q96M63 670 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 POLR3EQ9NVU0 708 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 PDE6AP16499 860 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 OSBP2Q969R2 916 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 SAR1BQ9Y6B6 198 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-201ENST00000321442 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 WDR78Q5VTH9 848 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 C8orf74Q6P047 294 aa18.38■□□□□ 0.53
SFXN1-201ENST00000321442 SCNN1DP51172 638 aa18.37■□□□□ 0.53
SFXN1-201ENST00000321442 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
SFXN1-201ENST00000321442 GNAT2P19087 354 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms