RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 USP17L8P0C7I0 530 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 RILPL1Q5EBL4 403 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 TC2NQ8N9U0 490 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 SLC44A5Q8NCS7 719 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 RASSF8Q8NHQ8 419 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 UBXN4Q92575 508 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 ZCCHC17Q9NP64 241 aaKnown RBP23.58■■□□□ 1.37
ZNF48-201ENST00000320159 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 TIGD1Q96MW7 591 aa23.58■■□□□ 1.37
ZNF48-201ENST00000320159 MYH2Q9UKX2 1941 aa23.58■■□□□ 1.36
ZNF48-201ENST00000320159 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 SRBD1Q8N5C6 995 aaKnown RBP23.57■■□□□ 1.36
ZNF48-201ENST00000320159 CATIPQ7Z7H3 387 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 ZNF512BQ96KM6 892 aaPredicted RBP23.57■■□□□ 1.36
ZNF48-201ENST00000320159 HINFPQ9BQA5 517 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 BAZ2AQ9UIF9 1905 aaKnown RBP23.57■■□□□ 1.36
ZNF48-201ENST00000320159 ERVV-1B6SEH8 477 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 GYS2P54840 703 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 NLRP5P59047 1200 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 RBL2Q08999 1139 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 WASF1Q92558 559 aa23.57■■□□□ 1.36
ZNF48-201ENST00000320159 FAM84BQ96KN1 310 aaPredicted RBP23.57■■□□□ 1.36
ZNF48-201ENST00000320159 WDR19Q8NEZ3 1342 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 CBFA2T2O43439 604 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 CTR9Q6PD62 1173 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 TMEM139Q8IV31 216 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 SEC23AQ15436 765 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 ALX1Q15699 326 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 SAP30BPQ9UHR5 308 aaKnown RBP23.56■■□□□ 1.36
ZNF48-201ENST00000320159 SHANK3Q9BYB0 1731 aa23.56■■□□□ 1.36
ZNF48-201ENST00000320159 KRT2P35908 639 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 CCDC12Q8WUD4 166 aaPredicted RBP23.55■■□□□ 1.36
ZNF48-201ENST00000320159 PAGE5Q96GU1 130 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 MINPP1Q9UNW1 487 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 MECOMQ03112 1051 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 DIXDC1Q155Q3 683 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 SPECC1LQ69YQ0 1117 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 STAG2Q8N3U4 1231 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 RIOK1Q9BRS2 568 aaKnown RBP23.55■■□□□ 1.36
ZNF48-201ENST00000320159 TSPY2A6NKD2 308 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 CUL4BQ13620 913 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 FAM98CQ17RN3 349 aaKnown RBP23.55■■□□□ 1.36
ZNF48-201ENST00000320159 TBC1D9BQ66K14 1250 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 ACRBPQ8NEB7 543 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 TAB2Q9NYJ8 693 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 SRPRBQ9Y5M8 271 aaKnown RBP23.55■■□□□ 1.36
ZNF48-201ENST00000320159 NUP98P52948 1817 aa23.55■■□□□ 1.36
ZNF48-201ENST00000320159 RNF225M0QZC1 329 aaPredicted RBP23.54■■□□□ 1.36
ZNF48-201ENST00000320159 CAVIN4Q5BKX8 364 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 KLHL34Q8N239 644 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 FOXP1Q9H334 677 aaPredicted RBP23.54■■□□□ 1.36
ZNF48-201ENST00000320159 MCM9Q9NXL9 1143 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 GDAQ9Y2T3 454 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 COL1A1P02452 1464 aaPredicted RBP23.54■■□□□ 1.36
ZNF48-201ENST00000320159 MORC3Q14149 939 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 IGSF22Q8N9C0 903 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 USP17L3A6NCW0 530 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 USP17L4A6NCW7 530 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 TRIM49BA6NDI0 452 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 CASP14P31944 242 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 RRAGBQ5VZM2 374 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 USP17L1Q7RTZ2 530 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 IQCA1Q86XH1 822 aa23.54■■□□□ 1.36
ZNF48-201ENST00000320159 RNF41Q9H4P4 317 aaPredicted RBP23.54■■□□□ 1.36
ZNF48-201ENST00000320159 PSDA5PKW4 1024 aaPredicted RBP23.53■■□□□ 1.36
ZNF48-201ENST00000320159 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 VAT1LQ9HCJ6 419 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 PARP3Q9Y6F1 533 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 CCDC196A0A1B0GTZ2 297 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 CASQ1P31415 396 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 GRIK5Q16478 980 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 RAD9BQ6WBX8 426 aa23.53■■□□□ 1.36
ZNF48-201ENST00000320159 TTC38Q5R3I4 469 aa23.52■■□□□ 1.36
ZNF48-201ENST00000320159 HOOK1Q9UJC3 728 aaKnown RBP23.52■■□□□ 1.36
ZNF48-201ENST00000320159 SPEF2Q9C093 1822 aa23.52■■□□□ 1.36
ZNF48-201ENST00000320159 IL17AQ16552 155 aa23.52■■□□□ 1.35
ZNF48-201ENST00000320159 KRT222Q8N1A0 295 aa23.52■■□□□ 1.35
ZNF48-201ENST00000320159 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.51■■□□□ 1.35
ZNF48-201ENST00000320159 SYNRGQ9UMZ2 1314 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 ITGB4P16144 1822 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 ATRNO75882 1429 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 TROAPQ12815 778 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 ZFP91Q96JP5 570 aaPredicted RBP23.51■■□□□ 1.35
ZNF48-201ENST00000320159 CDC5LQ99459 802 aaKnown RBP23.51■■□□□ 1.35
ZNF48-201ENST00000320159 FEZ1Q99689 392 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 STX8Q9UNK0 236 aa23.51■■□□□ 1.35
ZNF48-201ENST00000320159 FXR1P51114 621 aaKnown RBP eCLIP23.5■■□□□ 1.35
ZNF48-201ENST00000320159 CCDC93Q567U6 631 aa23.5■■□□□ 1.35
ZNF48-201ENST00000320159 GNAT2P19087 354 aa23.5■■□□□ 1.35
ZNF48-201ENST00000320159 TRIM10Q9UDY6 481 aa23.5■■□□□ 1.35
ZNF48-201ENST00000320159 WWC2Q6AWC2 1192 aa23.5■■□□□ 1.35
ZNF48-201ENST00000320159 CTCFLQ8NI51 663 aaPredicted RBP23.5■■□□□ 1.35
ZNF48-201ENST00000320159 L2HGDHQ9H9P8 463 aa23.5■■□□□ 1.35
ZNF48-201ENST00000320159 GNL3LQ9NVN8 582 aaKnown RBP23.5■■□□□ 1.35
ZNF48-201ENST00000320159 ZNF18P17022 549 aa23.49■■□□□ 1.35
ZNF48-201ENST00000320159 MTRQ99707 1265 aa23.49■■□□□ 1.35
ZNF48-201ENST00000320159 FAM205AQ6ZU69 1335 aa23.49■■□□□ 1.35
ZNF48-201ENST00000320159 PPFIBP1Q86W92 1011 aa23.49■■□□□ 1.35
ZNF48-201ENST00000320159 PHF20Q9BVI0 1012 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms