RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 ATP6V0A2Q9Y487 856 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
SHISA2-201ENST00000319420 ADAMTS3O15072 1205 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 SHC4Q6S5L8 630 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 CERS5Q8N5B7 392 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 VAT1LQ9HCJ6 419 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
SHISA2-201ENST00000319420 BECN2A8MW95 431 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 RAD21O60216 631 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 IL1R1P14778 569 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
SHISA2-201ENST00000319420 SYKP43405 635 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 RBM5P52756 815 aaKnown RBP eCLIP18.34■□□□□ 0.53
SHISA2-201ENST00000319420 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
SHISA2-201ENST00000319420 WNT7AO00755 349 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 ORC4O43929 436 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 PTPAQ15257 358 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 HOMER1Q86YM7 354 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 SP8Q8IXZ3 490 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 RASGRP4Q8TDF6 673 aa18.34■□□□□ 0.53
SHISA2-201ENST00000319420 GOLGA6L19H0YKK7 550 aa18.33■□□□□ 0.53
SHISA2-201ENST00000319420 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.53
SHISA2-201ENST00000319420 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.53
SHISA2-201ENST00000319420 DAGLAQ9Y4D2 1042 aa18.33■□□□□ 0.53
SHISA2-201ENST00000319420 FLT1P17948 1338 aa18.33■□□□□ 0.53
SHISA2-201ENST00000319420 STK36Q9NRP7 1315 aa18.33■□□□□ 0.53
SHISA2-201ENST00000319420 PLSCR1O15162 318 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 NPR1P16066 1061 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 NLRP5P59047 1200 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 TCP10Q12799 353 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 SBK1Q52WX2 424 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 USP49Q70CQ1 688 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 DUOX1Q9NRD9 1551 aa18.33■□□□□ 0.52
SHISA2-201ENST00000319420 XBP1P17861 261 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 FUT2Q10981 343 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 ZNF174Q15697 407 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 EYA3Q99504 573 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 FOXN1O15353 648 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 FGRP09769 529 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 CDK8P49336 464 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 PNOCQ13519 176 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 FAM196BA6NMK8 535 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 KCNF1Q9H3M0 494 aa18.32■□□□□ 0.52
SHISA2-201ENST00000319420 A0A1W2PQ27 194 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 A0A1W2PQ64 194 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 PDE6BP35913 854 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 RHBDL3P58872 404 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 STX1AQ16623 288 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 PIK3AP1Q6ZUJ8 805 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
SHISA2-201ENST00000319420 GPR75-ASB3A0A0A6YYF3 556 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 RASA1P20936 1047 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 CMA1P23946 247 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 HSP90AA4PQ58FG1 418 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 POTEAQ6S8J7 498 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
SHISA2-201ENST00000319420 KRT2P35908 639 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 IQCB1Q15051 598 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 LONRF3Q496Y0 759 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 RBM28Q9NW13 759 aaKnown RBP18.3■□□□□ 0.52
SHISA2-201ENST00000319420 TIAM2Q8IVF5 1701 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 CNTNAP5Q8WYK1 1306 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 DDAH1O94760 285 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 CALM1P0DP23 149 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 CALM2P0DP24 149 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 CALM3P0DP25 149 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 ALDH1B1P30837 517 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 HEATR3Q7Z4Q2 680 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
SHISA2-201ENST00000319420 MASTLQ96GX5 879 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
SHISA2-201ENST00000319420 USP40Q9NVE5 1235 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 KIAA1468Q9P260 1216 aa18.3■□□□□ 0.52
SHISA2-201ENST00000319420 CTAGE5O15320 804 aa18.29■□□□□ 0.52
SHISA2-201ENST00000319420 PRPF3O43395 683 aaKnown RBP18.29■□□□□ 0.52
SHISA2-201ENST00000319420 PPP4CP60510 307 aa18.29■□□□□ 0.52
SHISA2-201ENST00000319420 DEFB132Q7Z7B7 95 aa18.29■□□□□ 0.52
SHISA2-201ENST00000319420 FOXP1Q9H334 677 aaPredicted RBP18.29■□□□□ 0.52
SHISA2-201ENST00000319420 KCNH3Q9ULD8 1083 aa18.29■□□□□ 0.52
SHISA2-201ENST00000319420 POLR2DO15514 142 aaKnown RBP18.29■□□□□ 0.52
SHISA2-201ENST00000319420 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
SHISA2-201ENST00000319420 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
SHISA2-201ENST00000319420 CNNM3Q8NE01 707 aa18.29■□□□□ 0.52
SHISA2-201ENST00000319420 CEP95Q96GE4 821 aa18.29■□□□□ 0.52
SHISA2-201ENST00000319420 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
SHISA2-201ENST00000319420 H0YIN7 160 aa18.28■□□□□ 0.52
SHISA2-201ENST00000319420 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms