RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PRDX5P30044 214 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 TRAPPC10P48553 1259 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 NASPP49321 788 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 RCSD1Q6JBY9 416 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 SAMM50Q9Y512 469 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 SPTLC2O15270 562 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 KRT25Q7Z3Z0 450 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 SERPINA10Q9UK55 444 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 KLRG2A4D1S0 409 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 TSG101Q99816 390 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 USP25Q9UHP3 1055 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 ZNRF3Q9ULT6 936 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 MTMR6Q9Y217 621 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 CD2APQ9Y5K6 639 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 ECE2O60344 883 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
PDLIM5-201ENST00000317968 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 NSUN7Q8NE18 718 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 AGBL3Q8NEM8 1001 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 CHURC1Q8WUH1 139 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 SMARCE1Q969G3 411 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 UBR2Q8IWV8 1755 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 DKC1O60832 514 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 NAPAP54920 295 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 KIAA0825Q8IV33 1275 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 ZNF526Q8TF50 670 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 HERC5Q9UII4 1024 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 C5P01031 1676 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 FGFR1OPO95684 399 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 USP17L8P0C7I0 530 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 AMPD3Q01432 767 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 KRT40Q6A162 431 aa9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDLIM5-201ENST00000317968 DYNLL1P63167 89 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 C12orf60Q5U649 245 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 USP37Q86T82 979 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 FSIP1Q8NA03 581 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 NEDD1Q8NHV4 660 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 PSMD1Q99460 953 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 FMNL1O95466 1100 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 TNNT3P45378 269 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 CRKP46108 304 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 EVCP57679 992 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 TANGO6Q9C0B7 1094 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 ZSWIM5Q9P217 1185 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 MYO6Q9UM54 1294 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 PRPF3O43395 683 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 ZEB2O60315 1214 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 HOXD10P28358 340 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 SMARCA1P28370 1054 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 CALML4Q96GE6 196 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 N4BP2Q86UW6 1770 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 M0QZ92 97 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 NPM3O75607 178 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 AGXT2Q9BYV1 514 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 FOXP1Q9H334 677 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 SH3GLB2Q9NR46 395 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 SAP30BPQ9UHR5 308 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 PRDM1O75626 825 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 NAP1L1P55209 391 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 CEBPZQ03701 1054 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 SCRN1Q12765 414 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 TOB2Q14106 344 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 CERKLQ49MI3 558 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
PDLIM5-201ENST00000317968 CUTAO60888 179 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 TTLL1O95922 423 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 DIS3L2Q8IYB7 885 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 CAMKK2Q96RR4 588 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 PRKAB2O43741 272 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 C21orf2O43822 256 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 DNM1Q05193 864 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 ORC2Q13416 577 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 TMEM179Q6ZVK1 233 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 DBNDD1Q9H9R9 158 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 CBFA2T2O43439 604 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 PPP1R2P41236 205 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 ANO1Q5XXA6 986 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 CCDC144CPQ8IYA2 1237 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 SLC1A4P43007 532 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 ZNF827Q17R98 1081 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 CTR9Q6PD62 1173 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 CCDC82Q8N4S0 544 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 NHSQ6T4R5 1651 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 DIXDC1Q155Q3 683 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 RIOK1Q9BRS2 568 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 GRPEL1Q9HAV7 217 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 VAT1LQ9HCJ6 419 aa9.73□□□□□ -0.85
PDLIM5-201ENST00000317968 ZNHIT6Q9NWK9 470 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms