RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 FANCCQ00597 558 aa23.65■■□□□ 1.38
TTC39C-202ENST00000317571 MKRN1Q9UHC7 482 aaKnown RBP23.65■■□□□ 1.38
TTC39C-202ENST00000317571 A0A087X0B3 334 aa23.65■■□□□ 1.38
TTC39C-202ENST00000317571 SMTNL1A8MU46 457 aa23.65■■□□□ 1.38
TTC39C-202ENST00000317571 TMC6Q7Z403 805 aa23.65■■□□□ 1.38
TTC39C-202ENST00000317571 ARID3AQ99856 593 aa23.65■■□□□ 1.38
TTC39C-202ENST00000317571 RBM28Q9NW13 759 aaKnown RBP23.65■■□□□ 1.38
TTC39C-202ENST00000317571 ACTN4O43707 911 aaKnown RBP23.64■■□□□ 1.38
TTC39C-202ENST00000317571 NEMFO60524 1076 aa23.64■■□□□ 1.38
TTC39C-202ENST00000317571 AKAP17AQ02040 695 aaKnown RBP23.64■■□□□ 1.38
TTC39C-202ENST00000317571 SBK1Q52WX2 424 aa23.64■■□□□ 1.38
TTC39C-202ENST00000317571 ZNF579Q8NAF0 562 aaKnown RBP23.64■■□□□ 1.38
TTC39C-202ENST00000317571 MAN1B1Q9UKM7 699 aa23.64■■□□□ 1.38
TTC39C-202ENST00000317571 KRT2P35908 639 aa23.64■■□□□ 1.37
TTC39C-202ENST00000317571 FAM196AQ6ZSG2 479 aa23.64■■□□□ 1.37
TTC39C-202ENST00000317571 PDILTQ8N807 584 aa23.64■■□□□ 1.37
TTC39C-202ENST00000317571 LRRC4BQ9NT99 713 aa23.64■■□□□ 1.37
TTC39C-202ENST00000317571 ARPP21Q9UBL0 812 aaPredicted RBP23.64■■□□□ 1.37
TTC39C-202ENST00000317571 TNNT1P13805 278 aa23.63■■□□□ 1.37
TTC39C-202ENST00000317571 MYL5Q02045 173 aa23.63■■□□□ 1.37
TTC39C-202ENST00000317571 POSTNQ15063 836 aa23.63■■□□□ 1.37
TTC39C-202ENST00000317571 ELOA2Q8IYF1 753 aaPredicted RBP23.63■■□□□ 1.37
TTC39C-202ENST00000317571 TPD52L1Q16890 204 aaPredicted RBP23.63■■□□□ 1.37
TTC39C-202ENST00000317571 ZNF827Q17R98 1081 aa23.63■■□□□ 1.37
TTC39C-202ENST00000317571 RFC4P35249 363 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 SARSP49591 514 aaKnown RBP23.62■■□□□ 1.37
TTC39C-202ENST00000317571 GRAPQ13588 217 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 DIXDC1Q155Q3 683 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 PTPN21Q16825 1174 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 DZIP1Q86YF9 867 aaKnown RBP23.62■■□□□ 1.37
TTC39C-202ENST00000317571 GRAPLQ8TC17 118 aaPredicted RBP23.62■■□□□ 1.37
TTC39C-202ENST00000317571 MCM9Q9NXL9 1143 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 IMPACTQ9P2X3 320 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 EP400Q96L91 3159 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 CALM1P0DP23 149 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 CALM2P0DP24 149 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 CALM3P0DP25 149 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 DYNLL2Q96FJ2 89 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 ANKIB1Q9P2G1 1089 aa23.62■■□□□ 1.37
TTC39C-202ENST00000317571 TRAPPC3LQ5T215 181 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 NT5DC1Q5TFE4 455 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 SH3RF3Q8TEJ3 882 aaPredicted RBP23.61■■□□□ 1.37
TTC39C-202ENST00000317571 EPSTI1Q96J88 318 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 MED15Q96RN5 788 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 ZMYND15Q9H091 742 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 IL17RBQ9NRM6 502 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 FANCLQ9NW38 375 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 TRIM75PA6NK02 468 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 NPHP1O15259 732 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 GSDMDP57764 484 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 FMR1Q06787 632 aaKnown RBP eCLIP23.61■■□□□ 1.37
TTC39C-202ENST00000317571 NYAP1Q6ZVC0 841 aa23.61■■□□□ 1.37
TTC39C-202ENST00000317571 ZBTB22O15209 634 aa23.6■■□□□ 1.37
TTC39C-202ENST00000317571 XBP1P17861 261 aa23.6■■□□□ 1.37
TTC39C-202ENST00000317571 TPM4P67936 248 aa23.6■■□□□ 1.37
TTC39C-202ENST00000317571 C12orf60Q5U649 245 aa23.6■■□□□ 1.37
TTC39C-202ENST00000317571 INTS13Q9NVM9 706 aa23.6■■□□□ 1.37
TTC39C-202ENST00000317571 TRMT1Q9NXH9 659 aaKnown RBP23.6■■□□□ 1.37
TTC39C-202ENST00000317571 CEP131Q9UPN4 1083 aa23.6■■□□□ 1.37
TTC39C-202ENST00000317571 TSPY2A6NKD2 308 aa23.59■■□□□ 1.37
TTC39C-202ENST00000317571 PRR5LQ6MZQ0 368 aa23.59■■□□□ 1.37
TTC39C-202ENST00000317571 CCAR2Q8N163 923 aaKnown RBP23.59■■□□□ 1.37
TTC39C-202ENST00000317571 CNBD1Q8NA66 436 aa23.59■■□□□ 1.37
TTC39C-202ENST00000317571 MORC2Q9Y6X9 1032 aaPredicted RBP23.59■■□□□ 1.37
TTC39C-202ENST00000317571 TMEM232C9JQI7 657 aa23.59■■□□□ 1.37
TTC39C-202ENST00000317571 MORC3Q14149 939 aa23.59■■□□□ 1.37
TTC39C-202ENST00000317571 CTCFLQ8NI51 663 aaPredicted RBP23.59■■□□□ 1.37
TTC39C-202ENST00000317571 LDHBP07195 334 aaKnown RBP23.58■■□□□ 1.37
TTC39C-202ENST00000317571 ZNF174Q15697 407 aa23.58■■□□□ 1.37
TTC39C-202ENST00000317571 HSP90AA4PQ58FG1 418 aa23.58■■□□□ 1.37
TTC39C-202ENST00000317571 OLFM4Q6UX06 510 aa23.58■■□□□ 1.37
TTC39C-202ENST00000317571 CDK5RAP2Q96SN8 1893 aa23.58■■□□□ 1.37
TTC39C-202ENST00000317571 E4F1Q66K89 784 aaPredicted RBP23.58■■□□□ 1.36
TTC39C-202ENST00000317571 SPATA20Q8TB22 786 aa23.58■■□□□ 1.36
TTC39C-202ENST00000317571 NAV1Q8NEY1 1877 aa23.58■■□□□ 1.36
TTC39C-202ENST00000317571 UBR3Q6ZT12 1888 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 CTIFO43310 598 aaKnown RBP23.57■■□□□ 1.36
TTC39C-202ENST00000317571 SCG2P13521 617 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 CASP1P29466 404 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 TFAP4Q01664 338 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 SLC35G1Q2M3R5 365 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 SLC44A5Q8NCS7 719 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 SYMPKQ92797 1274 aaKnown RBP23.57■■□□□ 1.36
TTC39C-202ENST00000317571 LEMD3Q9Y2U8 911 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 XDHP47989 1333 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 UBASH3AP57075 661 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 GPSM2P81274 684 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 SPTY2D1Q68D10 685 aaPredicted RBP23.57■■□□□ 1.36
TTC39C-202ENST00000317571 TRMT44Q8IYL2 757 aaKnown RBP23.57■■□□□ 1.36
TTC39C-202ENST00000317571 STAG2Q8N3U4 1231 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 DHX58Q96C10 678 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 KCND1Q9NSA2 647 aa23.57■■□□□ 1.36
TTC39C-202ENST00000317571 PFKFB3Q16875 520 aaPredicted RBP23.56■■□□□ 1.36
TTC39C-202ENST00000317571 WDR66Q8TBY9 1149 aa23.56■■□□□ 1.36
TTC39C-202ENST00000317571 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
TTC39C-202ENST00000317571 TTC38Q5R3I4 469 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 CCDC150Q8NCX0 1101 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 SMARCE1Q969G3 411 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 ROBO3Q96MS0 1386 aa23.55■■□□□ 1.36
TTC39C-202ENST00000317571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms