RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 GOLGA6AQ9NYA3 693 aa13.22□□□□□ -0.29
LDLRAD3-201ENST00000315571 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 YIPF3Q9GZM5 350 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 GNGT1P63211 74 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 GOLGA8FQ08AF8 430 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 GOLGA8DPQ0D2H9 430 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 SNX1Q13596 522 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 PTPN21Q16825 1174 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.29
LDLRAD3-201ENST00000315571 CTAGE5O15320 804 aa13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 KIF5CO60282 957 aa13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 CDC25BP30305 580 aa13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 CDC5LQ99459 802 aaKnown RBP13.21□□□□□ -0.3
LDLRAD3-201ENST00000315571 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CRYMQ14894 314 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 B4GALNT4Q76KP1 1039 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CAGE1Q8TC20 777 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 TACO1Q9BSH4 297 aaKnown RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CNNM1Q9NRU3 951 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CTAGE15A4D2H0 777 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CTAGE8P0CG41 777 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 POLD1P28340 1107 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CTAGE6Q86UF2 777 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CTAGE4Q8IX94 777 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 DHX58Q96C10 678 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 PHLPP2Q6ZVD8 1323 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 KLHL33A6NCF5 533 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 SEC31BQ9NQW1 1179 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 ATF5Q9Y2D1 282 aaPredicted RBP13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 CYP46A1Q9Y6A2 500 aa13.2□□□□□ -0.3
LDLRAD3-201ENST00000315571 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 TRAF1Q13077 416 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 RHPN1Q8TCX5 695 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 MYBL2P10244 700 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 UBASH3AP57075 661 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 SNCBQ16143 134 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 PARD3BQ8TEW8 1205 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 EYA2O00167 538 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 HSPA4P34932 840 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCDC70Q6NSX1 233 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 BRIP1Q9BX63 1249 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 BAIAP2L1Q9UHR4 511 aa13.19□□□□□ -0.3
LDLRAD3-201ENST00000315571 BUB1BO60566 1050 aaPredicted RBP13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 IL15P40933 162 aaPredicted RBP13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 ARHGAP25P42331 645 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 PDE1AP54750 535 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 CAPS2Q9BXY5 557 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 RTL9Q8NET4 1388 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCDC121Q6ZUS5 278 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 CLASRPQ8N2M8 674 aaKnown RBP13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 KLC4Q9NSK0 619 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 IMPACTQ9P2X3 320 aa13.18□□□□□ -0.3
LDLRAD3-201ENST00000315571 QSER1Q2KHR3 1735 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 CPLX3Q8WVH0 158 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 HINFPQ9BQA5 517 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 RIPOR2Q9Y4F9 1068 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 ADCY2Q08462 1091 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 ZKSCAN4Q969J2 545 aaPredicted RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 CEP126Q9P2H0 1117 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 CIAO1O76071 339 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 CPP00450 1065 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 STIM1Q13586 685 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 LEO1Q8WVC0 666 aaPredicted RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 DESI2Q9BSY9 194 aa13.17□□□□□ -0.3
LDLRAD3-201ENST00000315571 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 ENOX2Q16206 610 aaKnown RBP13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 FKBP15Q5T1M5 1219 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 IGSF22Q8N9C0 903 aa13.16□□□□□ -0.3
LDLRAD3-201ENST00000315571 CCDC40Q4G0X9 1142 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms