RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZMYND10O75800 440 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 UBXN1Q04323 297 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 ZNF174Q15697 407 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
PTPN7-201ENST00000309017 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 KRT23Q9C075 422 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 FOXP1Q9H334 677 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-201ENST00000309017 BRMS1Q9HCU9 246 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
PTPN7-201ENST00000309017 RNF40O75150 1001 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 DDX17Q92841 729 aaKnown RBP12.6□□□□□ -0.39
PTPN7-201ENST00000309017 CNNM2Q9H8M5 875 aa12.6□□□□□ -0.39
PTPN7-201ENST00000309017 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
PTPN7-201ENST00000309017 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 ABL1P00519 1130 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 ITGA6P23229 1130 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 PHKA1P46020 1223 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 MAP3K12Q12852 859 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 MKRN1Q9UHC7 482 aaKnown RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 GYPCP04921 128 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 TUBBP07437 444 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 CCDC70Q6NSX1 233 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 CCDC51Q96ER9 411 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 MED15Q96RN5 788 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 SARSP49591 514 aaKnown RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 CCDC122Q5T0U0 273 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 AKNAD1Q5T1N1 836 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 PAGE5Q96GU1 130 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
PTPN7-201ENST00000309017 MED4Q9NPJ6 270 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 RAB21Q9UL25 225 aa12.59□□□□□ -0.39
PTPN7-201ENST00000309017 PRDM1O75626 825 aa12.58□□□□□ -0.39
PTPN7-201ENST00000309017 LIFRP42702 1097 aa12.58□□□□□ -0.39
PTPN7-201ENST00000309017 UBE3CQ15386 1083 aa12.58□□□□□ -0.39
PTPN7-201ENST00000309017 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.39
PTPN7-201ENST00000309017 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.39
PTPN7-201ENST00000309017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.39
PTPN7-201ENST00000309017 SLC4A4Q9Y6R1 1079 aa12.58□□□□□ -0.39
PTPN7-201ENST00000309017 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.39
PTPN7-201ENST00000309017 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-201ENST00000309017 KRT31Q15323 416 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 EFCC1Q9HA90 598 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 ABHD10Q9NUJ1 306 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 HDAC6Q9UBN7 1215 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 USP5P45974 858 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 SPAG1Q07617 926 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 TCIRG1Q13488 830 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 MICALL1Q8N3F8 863 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 JADE2Q9NQC1 790 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 TRIM10Q9UDY6 481 aa12.58□□□□□ -0.4
PTPN7-201ENST00000309017 PRKAB2O43741 272 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 MCM3P25205 808 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 EIF5P55010 431 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 NT5DC1Q5TFE4 455 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 STRBPQ96SI9 672 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 GREM2Q9H772 168 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 STK36Q9NRP7 1315 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 PATL2C9JE40 543 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 SRGAP2O75044 1071 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 KRT2P35908 639 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 ERVK-24P63145 666 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 STIM1Q13586 685 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 DEF6Q9H4E7 631 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 PAK1Q13153 545 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 GSDMAQ96QA5 445 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 LUC7L2Q9Y383 392 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
PTPN7-201ENST00000309017 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
PTPN7-201ENST00000309017 KCNJ18B7U540 433 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 MAGEA9P43362 315 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 KCNJ12Q14500 433 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 GSPT2Q8IYD1 628 aaKnown RBP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 ELOA2Q8IYF1 753 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 DRC1Q96MC2 740 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 CHP1Q99653 195 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms