RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CACNA2D4Q7Z3S7 1137 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 TULP2O00295 520 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 TNNI2P48788 182 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 UTP6Q9NYH9 597 aaKnown RBP17.03■□□□□ 0.32
LEMD3-201ENST00000308330 ANKRD62A6NC57 917 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 NMIQ13287 307 aaPredicted RBP17.03■□□□□ 0.32
LEMD3-201ENST00000308330 GRAMD4Q6IC98 578 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 B4GALNT2Q8NHY0 566 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 TAF4BQ92750 862 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
LEMD3-201ENST00000308330 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
LEMD3-201ENST00000308330 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 ACTR5Q9H9F9 607 aaPredicted RBP17.02■□□□□ 0.32
LEMD3-201ENST00000308330 JADE2Q9NQC1 790 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 DACT1Q9NYF0 836 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 KDM5CP41229 1560 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 IFT88Q13099 833 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 CPLX3Q8WVH0 158 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 RAB34Q9BZG1 259 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
LEMD3-201ENST00000308330 UBASH3AP57075 661 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 TTC6Q86TZ1 520 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 TMTC2Q8N394 836 aa17.02■□□□□ 0.32
LEMD3-201ENST00000308330 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
LEMD3-201ENST00000308330 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
LEMD3-201ENST00000308330 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
LEMD3-201ENST00000308330 NEURL1BA8MQ27 555 aa17.02■□□□□ 0.31
LEMD3-201ENST00000308330 TAF11Q15544 211 aa17.02■□□□□ 0.31
LEMD3-201ENST00000308330 XAGE2Q96GT9 111 aa17.02■□□□□ 0.31
LEMD3-201ENST00000308330 ZBTB43O43298 467 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 GNAT2P19087 354 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 TCERG1LQ5VWI1 586 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 RABGGTAQ92696 567 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 TANGO6Q9C0B7 1094 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 GKAP1Q5VSY0 366 aaPredicted RBP17.01■□□□□ 0.31
LEMD3-201ENST00000308330 EHMT1Q9H9B1 1298 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 C2CD5Q86YS7 1000 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 NOP53Q9NZM5 478 aaKnown RBP17.01■□□□□ 0.31
LEMD3-201ENST00000308330 SCOCQ9UIL1 159 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 SUPT20HQ8NEM7 779 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 LPIN2Q92539 896 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 BICD1Q96G01 975 aa17.01■□□□□ 0.31
LEMD3-201ENST00000308330 HPDP32754 393 aaPredicted RBP17■□□□□ 0.31
LEMD3-201ENST00000308330 ETF1P62495 437 aaKnown RBP17■□□□□ 0.31
LEMD3-201ENST00000308330 ADCY2Q08462 1091 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 ZNF569Q5MCW4 686 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 STMN2Q93045 179 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 SMIM23A6NLE4 172 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 MBD4O95243 580 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 CCDC178Q5BJE1 867 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
LEMD3-201ENST00000308330 UBE4AQ14139 1066 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 MIEF2Q96C03 454 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 CFAP57Q96MR6 1250 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 KLC4Q9NSK0 619 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 ATP7BP35670 1465 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
LEMD3-201ENST00000308330 PACS2Q86VP3 889 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 CCHCR1Q8TD31 782 aa17■□□□□ 0.31
LEMD3-201ENST00000308330 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
LEMD3-201ENST00000308330 RNF40O75150 1001 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 VAV2P52735 878 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 TMEM266Q2M3C6 531 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 CCDC63Q8NA47 563 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 PIGBQ92521 554 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 CTIFO43310 598 aaKnown RBP16.99■□□□□ 0.31
LEMD3-201ENST00000308330 RNF8O76064 485 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 WDR75Q8IWA0 830 aaKnown RBP16.99■□□□□ 0.31
LEMD3-201ENST00000308330 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 CCDC151A5D8V7 595 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
LEMD3-201ENST00000308330 THRAP3Q9Y2W1 955 aaKnown RBP16.99■□□□□ 0.31
LEMD3-201ENST00000308330 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 SPA17Q15506 151 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 SYCP3Q8IZU3 236 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 LZTFL1Q9NQ48 299 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 TRIM74Q86UV6 250 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 TRIM73Q86UV7 250 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 TFIP11Q9UBB9 837 aaKnown RBP16.98■□□□□ 0.31
LEMD3-201ENST00000308330 GNAQP50148 359 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 PLS1Q14651 629 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 CCDC110Q8TBZ0 833 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 RAB3IL1Q8TBN0 382 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 CNKSR1Q969H4 720 aa16.98■□□□□ 0.31
LEMD3-201ENST00000308330 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
LEMD3-201ENST00000308330 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
LEMD3-201ENST00000308330 ZNF711Q9Y462 761 aa16.97■□□□□ 0.31
LEMD3-201ENST00000308330 SLC8A3P57103 927 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms