RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 COMMD10Q9Y6G5 202 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 MAP3K15Q6ZN16 1313 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 ADCY9O60503 1353 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 SASH1O94885 1247 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 TSGA10Q9BZW7 698 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 SH2D4AQ9H788 454 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 KRT5P13647 590 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 NBPF11Q86T75 865 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 CCDC84Q86UT8 332 aaPredicted RBP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 UBLCP1Q8WVY7 318 aaPredicted RBP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 GDAP1L1Q96MZ0 367 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 BCL2L12Q9HB09 334 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 MTRF1LQ9UGC7 380 aaKnown RBP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 MYCLP12524 364 aaPredicted RBP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 UBE3CQ15386 1083 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 BLIDQ8IZY5 108 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 GPKOWQ92917 476 aaPredicted RBP eCLIP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 SECISBP2LQ93073 1101 aaKnown RBP23.17■■□□□ 1.3
LTBP3-201ENST00000301873 NUP58Q9BVL2 599 aa23.17■■□□□ 1.3
LTBP3-201ENST00000301873 LOC102724428A0A0B4J2F2 783 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 KLRF2D3W0D1 207 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 SIK1P57059 783 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 MICALL1Q8N3F8 863 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 ARPP21Q9UBL0 812 aaPredicted RBP23.16■■□□□ 1.3
LTBP3-201ENST00000301873 MTUS1Q9ULD2 1270 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 KDM5CP41229 1560 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 GRM1Q13255 1194 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 APOA5Q6Q788 366 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 OTUD6BQ8N6M0 293 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 RDH13Q8NBN7 331 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 FAM76AQ8TAV0 307 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 CEP83Q9Y592 693 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 LARGE1O95461 756 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 CALRP27797 417 aaKnown RBP23.16■■□□□ 1.3
LTBP3-201ENST00000301873 PTPN12Q05209 780 aaKnown RBP23.16■■□□□ 1.3
LTBP3-201ENST00000301873 RRAGAQ7L523 313 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 RABEP2Q9H5N1 569 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 NRBP1Q9UHY1 535 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 MAST3O60307 1309 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 ARHGEF5Q12774 1597 aa23.16■■□□□ 1.3
LTBP3-201ENST00000301873 HPDP32754 393 aaPredicted RBP23.15■■□□□ 1.3
LTBP3-201ENST00000301873 ERCC6LQ2NKX8 1250 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 GLT8D2Q9H1C3 349 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 USP40Q9NVE5 1235 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 SERPINA10Q9UK55 444 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 ZMYM6O95789 1325 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 KLHL30Q0D2K2 578 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 VWA3BQ502W6 1294 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 KRBA2Q6ZNG9 492 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 TBC1D22AQ8WUA7 517 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 LZTS2Q9BRK4 669 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 ZNF215Q9UL58 517 aaPredicted RBP23.15■■□□□ 1.3
LTBP3-201ENST00000301873 NEO1Q92859 1461 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 NF2P35240 595 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 PTGDRQ13258 359 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 NSUN7Q8NE18 718 aaKnown RBP23.15■■□□□ 1.3
LTBP3-201ENST00000301873 TTC16Q8NEE8 873 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 KCNK9Q9NPC2 374 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 TECP42680 631 aa23.15■■□□□ 1.3
LTBP3-201ENST00000301873 EXOC3O60645 756 aa23.14■■□□□ 1.3
LTBP3-201ENST00000301873 C2CD5Q86YS7 1000 aa23.14■■□□□ 1.3
LTBP3-201ENST00000301873 CCDC114Q96M63 670 aa23.14■■□□□ 1.3
LTBP3-201ENST00000301873 NOX5Q96PH1 765 aa23.14■■□□□ 1.3
LTBP3-201ENST00000301873 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.3
LTBP3-201ENST00000301873 PCDHB13Q9Y5F0 798 aa23.14■■□□□ 1.3
LTBP3-201ENST00000301873 CEP104O60308 925 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 KCNQ4P56696 695 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 TYW1BQ6NUM6 668 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 MYCT1Q8N699 235 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 OR8K1Q8NGG5 319 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 ZBTB16Q05516 673 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 DDX12PQ92771 950 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 OSBP2Q969R2 916 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 PLEKHA4Q9H4M7 779 aa23.14■■□□□ 1.29
LTBP3-201ENST00000301873 B4DLN1 442 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 ASIC2Q16515 512 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 GINS2Q9Y248 185 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 SCG2P13521 617 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 ETF1P62495 437 aaKnown RBP23.13■■□□□ 1.29
LTBP3-201ENST00000301873 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 GCNT3O95395 438 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 SMTNP53814 917 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 CCDC26Q8TAB7 109 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 USP6P35125 1406 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 ERBB3P21860 1342 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 ZNF500O60304 480 aaPredicted RBP23.13■■□□□ 1.29
LTBP3-201ENST00000301873 C10orf67Q8IYJ2 551 aa23.13■■□□□ 1.29
LTBP3-201ENST00000301873 KLHL7Q8IXQ5 586 aa23.12■■□□□ 1.29
LTBP3-201ENST00000301873 NSRP1Q9H0G5 558 aaKnown RBP23.12■■□□□ 1.29
LTBP3-201ENST00000301873 TMEM94Q12767 1356 aa23.12■■□□□ 1.29
LTBP3-201ENST00000301873 LRRC47Q8N1G4 583 aaKnown RBP23.12■■□□□ 1.29
LTBP3-201ENST00000301873 PYCARDQ9ULZ3 195 aa23.12■■□□□ 1.29
LTBP3-201ENST00000301873 H0YIN7 160 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 SCNN1DP51172 638 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 RBM6P78332 1123 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms