RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
TMEM41A-201ENST00000296254 KIAA1683Q9H0B3 1180 aa19.47■□□□□ 0.71
TMEM41A-201ENST00000296254 ANTXR1Q9H6X2 564 aa19.47■□□□□ 0.71
TMEM41A-201ENST00000296254 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
TMEM41A-201ENST00000296254 LAMA2P24043 3122 aaKnown RBP19.47■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L15C9J2P7 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L13C9JLJ4 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L11C9JVI0 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L18D6R9N7 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L22D6RA61 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L17D6RBQ6 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L19D6RCP7 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L20D6RJB6 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 CNMDO75829 334 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 VCAM1P19320 739 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP14P54578 494 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 USP17L24Q0WX57 530 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 MAP3K12Q12852 859 aa19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 ZYXQ15942 572 aaKnown RBP19.46■□□□□ 0.71
TMEM41A-201ENST00000296254 COL6A1P12109 1028 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 SYN1P17600 705 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 CCND3P30281 292 aaPredicted RBP19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 CERKLQ49MI3 558 aaPredicted RBP19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 LHX8Q68G74 356 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 TTC6Q86TZ1 520 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 RIOK1Q9BRS2 568 aaKnown RBP19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 NAV1Q8NEY1 1877 aa19.45■□□□□ 0.7
TMEM41A-201ENST00000296254 SHMT1P34896 483 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 MAGEA10P43363 369 aaPredicted RBP19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 CCNA1P78396 465 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 MAP2K5Q13163 448 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 AACSQ86V21 672 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 ERC1Q8IUD2 1116 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 CWC22Q9HCG8 908 aaKnown RBP19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 FRMPD3Q5JV73 1810 aa19.44■□□□□ 0.7
TMEM41A-201ENST00000296254 PLCD1P51178 756 aa19.43■□□□□ 0.7
TMEM41A-201ENST00000296254 CATSPERGQ6ZRH7 1159 aa19.43■□□□□ 0.7
TMEM41A-201ENST00000296254 GLRX3O76003 335 aaKnown RBP19.42■□□□□ 0.7
TMEM41A-201ENST00000296254 HNRNPUQ00839 825 aaKnown RBP eCLIP19.42■□□□□ 0.7
TMEM41A-201ENST00000296254 GABPAQ06546 454 aa19.42■□□□□ 0.7
TMEM41A-201ENST00000296254 GPR153Q6NV75 609 aa19.42■□□□□ 0.7
TMEM41A-201ENST00000296254 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 GUCY1A2P33402 732 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 GRB14Q14449 540 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 LRIT3Q3SXY7 679 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 TDHQ8IZJ6 230 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 EDC3Q96F86 508 aaKnown RBP19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 RPAP3Q9H6T3 665 aaPredicted RBP19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 CABP5Q9NP86 173 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 FLRT1Q9NZU1 646 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 BTBD7Q9P203 1132 aa19.41■□□□□ 0.7
TMEM41A-201ENST00000296254 MAGEB6P1A0A0J9YX57 407 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 SLC15A5A6NIM6 579 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 HOXC6P09630 235 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 PDE6AP16499 860 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 PTPREP23469 700 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 TTF1Q15361 905 aaPredicted RBP19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 LRRC26Q2I0M4 334 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 WDR78Q5VTH9 848 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 MFSD14CQ5VZR4 134 aa19.4■□□□□ 0.7
TMEM41A-201ENST00000296254 A0A0G2JMZ2 1700 aa19.39■□□□□ 0.7
TMEM41A-201ENST00000296254 ZNF236Q9UL36 1845 aa19.39■□□□□ 0.7
TMEM41A-201ENST00000296254 HSP90AB4PQ58FF6 505 aa19.39■□□□□ 0.69
TMEM41A-201ENST00000296254 CRNKL1Q9BZJ0 848 aaKnown RBP19.39■□□□□ 0.69
TMEM41A-201ENST00000296254 IL1RAPL2Q9NP60 686 aa19.39■□□□□ 0.69
TMEM41A-201ENST00000296254 IVNS1ABPQ9Y6Y0 642 aa19.39■□□□□ 0.69
TMEM41A-201ENST00000296254 UNC80Q8N2C7 3258 aa19.39■□□□□ 0.69
TMEM41A-201ENST00000296254 POLR3DP05423 398 aaPredicted RBP19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 EVX2Q03828 476 aa19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 SEPT2Q15019 361 aa19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 RHPN1Q8TCX5 695 aa19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 PANK1Q8TE04 598 aa19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 UBE2OQ9C0C9 1292 aaKnown RBP19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 MCM9Q9NXL9 1143 aa19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 DDX20Q9UHI6 824 aaKnown RBP19.38■□□□□ 0.69
TMEM41A-201ENST00000296254 A0A1W2PRG0 241 aa19.37■□□□□ 0.69
TMEM41A-201ENST00000296254 MSCO60682 206 aa19.37■□□□□ 0.69
TMEM41A-201ENST00000296254 SLC17A8Q8NDX2 589 aa19.37■□□□□ 0.69
TMEM41A-201ENST00000296254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMEM41A-201ENST00000296254 ZNF532Q9HCE3 1301 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 TCRBV5S4A2TA0A5A2 114 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 IGHA2P01877 340 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 DEFB123Q8N688 67 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 NPLOC4Q8TAT6 608 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 SDR42E1Q8WUS8 393 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 LPAR1Q92633 364 aa19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
TMEM41A-201ENST00000296254 GOLIM4O00461 696 aa19.35■□□□□ 0.69
TMEM41A-201ENST00000296254 MPHOSPH10O00566 681 aaKnown RBP19.35■□□□□ 0.69
TMEM41A-201ENST00000296254 CYP2C19P33261 490 aa19.35■□□□□ 0.69
TMEM41A-201ENST00000296254 ATP2B2Q01814 1243 aa19.35■□□□□ 0.69
TMEM41A-201ENST00000296254 CLASRPQ8N2M8 674 aaKnown RBP19.35■□□□□ 0.69
TMEM41A-201ENST00000296254 LCORLQ8N3X6 602 aa19.35■□□□□ 0.69
TMEM41A-201ENST00000296254 KIF1BPQ96EK5 621 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms