RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-201ENST00000286835 IVLP07476 585 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 ADD2P35612 726 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 MAP3K9P80192 1104 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 CCDC93Q567U6 631 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 ENOX1Q8TC92 643 aaKnown RBP15.12■□□□□ 0.01
SCAF4-201ENST00000286835 DIP2AQ14689 1571 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 MYO1CO00159 1063 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
SCAF4-201ENST00000286835 SALL1Q9NSC2 1324 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 FAM205CA6NFA0 338 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
SCAF4-201ENST00000286835 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 PDE4CQ08493 712 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
SCAF4-201ENST00000286835 LUC7L2Q9Y383 392 aaKnown RBP15.12■□□□□ 0.01
SCAF4-201ENST00000286835 RRP15Q9Y3B9 282 aaKnown RBP15.12■□□□□ 0.01
SCAF4-201ENST00000286835 A0A0U1RQJ8 604 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 STAT6P42226 847 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 MRPS25P82663 173 aaKnown RBP15.11■□□□□ 0.01
SCAF4-201ENST00000286835 SPATA1Q5VX52 437 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 MICALL1Q8N3F8 863 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 ATRIPQ8WXE1 791 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 ESR2Q92731 530 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 AGXT2Q9BYV1 514 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 TTF2Q9UNY4 1162 aaKnown RBP15.11■□□□□ 0.01
SCAF4-201ENST00000286835 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 MMP1P03956 469 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.015e-7■■□□□ 12.8
SCAF4-201ENST00000286835 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
SCAF4-201ENST00000286835 RAD9BQ6WBX8 426 aa15.11■□□□□ 0.01
SCAF4-201ENST00000286835 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
SCAF4-201ENST00000286835 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
SCAF4-201ENST00000286835 XRN1Q8IZH2 1706 aaKnown RBP15.11■□□□□ 0.01
SCAF4-201ENST00000286835 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 ACTN2P35609 894 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 SPA17Q15506 151 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 CCDC96Q2M329 555 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 CCDC152Q4G0S7 254 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 IQUBQ8NA54 791 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 FAM107BQ9H098 131 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 UBA7P41226 1012 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 CYP26C1Q6V0L0 522 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 GOLGA5Q8TBA6 731 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 CDCA7Q9BWT1 371 aaPredicted RBP15.1■□□□□ 0.01
SCAF4-201ENST00000286835 FAM204AQ9H8W3 233 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 ADGRG1Q9Y653 693 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 MYO6Q9UM54 1294 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
SCAF4-201ENST00000286835 KCNJ6P48051 423 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 NELFBQ8WX92 580 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
SCAF4-201ENST00000286835 RFX7Q2KHR2 1363 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 ATP8B1O43520 1251 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 SRGAP2O75044 1071 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 CIAO1O76071 339 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCAF4-201ENST00000286835 CASP8Q14790 479 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 PTPAQ15257 358 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 PTPREP23469 700 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 GTF2A1P52655 376 aaPredicted RBP15.09■□□□□ 0.01
SCAF4-201ENST00000286835 TTC38Q5R3I4 469 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 TTC19Q6DKK2 380 aaPredicted RBP15.09■□□□□ 0.01
SCAF4-201ENST00000286835 LY9Q9HBG7 655 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 FAM208AQ9UK61 1670 aaKnown RBP15.09■□□□□ 0.01
SCAF4-201ENST00000286835 FMNL1O95466 1100 aaPredicted RBP15.09■□□□□ 0.01
SCAF4-201ENST00000286835 VSNL1P62760 191 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 PAK1Q13153 545 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 GPATCH11Q8N954 259 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 AFAP1L1Q8TED9 768 aa15.09■□□□□ 0.01
SCAF4-201ENST00000286835 H3BQF6 201 aa15.08■□□□□ 0.01
SCAF4-201ENST00000286835 PTGDRQ13258 359 aa15.08■□□□□ 0.01
SCAF4-201ENST00000286835 TTC31Q49AM3 519 aaPredicted RBP15.08■□□□□ 0.01
SCAF4-201ENST00000286835 TFCP2L1Q9NZI6 479 aa15.08■□□□□ 0.01
SCAF4-201ENST00000286835 NCAPD2Q15021 1401 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 CCDC194A0A1B0GVG4 234 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 ZRANB2O95218 330 aaKnown RBP eCLIP15.08■□□□□ 01e-6■■■■□ 23.3
SCAF4-201ENST00000286835 IDEP14735 1019 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 BMP6P22004 513 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 BCAMP50895 628 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 SPAG1Q07617 926 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 GSPT2Q8IYD1 628 aaKnown RBP15.08■□□□□ 0
SCAF4-201ENST00000286835 EXOC4Q96A65 974 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 FUT8Q9BYC5 575 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 HDAC6Q9UBN7 1215 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 TFR2Q9UP52 801 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 MYO1BO43795 1136 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 INTS13Q9NVM9 706 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 TNKSO95271 1327 aa15.08■□□□□ 0
SCAF4-201ENST00000286835 KCNJ18B7U540 433 aa15.07■□□□□ 0
SCAF4-201ENST00000286835 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms