RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 CALM3P0DP25 149 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 ADD1P35611 737 aaKnown RBP21.41■■□□□ 1.02
NIFK-201ENST00000285814 PPP2R5BQ15173 497 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 RTN1Q16799 776 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 CERKLQ49MI3 558 aaPredicted RBP21.41■■□□□ 1.02
NIFK-201ENST00000285814 DPY19L2Q6NUT2 758 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 CCDC144CPQ8IYA2 1237 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 FANCBQ8NB91 859 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 L3MBTL3Q96JM7 780 aaPredicted RBP21.41■■□□□ 1.02
NIFK-201ENST00000285814 KAT14Q9H8E8 782 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 HIRAP54198 1017 aaPredicted RBP21.41■■□□□ 1.02
NIFK-201ENST00000285814 CDAN1Q8IWY9 1227 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 ADARB2Q9NS39 739 aaKnown RBP21.41■■□□□ 1.02
NIFK-201ENST00000285814 MTMR4Q9NYA4 1195 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 STX8Q9UNK0 236 aa21.41■■□□□ 1.02
NIFK-201ENST00000285814 CCDC196A0A1B0GTZ2 297 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 SYT1P21579 422 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 MAP3K10Q02779 954 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 NTRK3Q16288 839 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 APOBEC3FQ8IUX4 373 aaKnown RBP21.4■■□□□ 1.02
NIFK-201ENST00000285814 PNMA1Q8ND90 353 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 NUP133Q8WUM0 1156 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 TEPSINQ96N21 525 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 TMEM47Q9BQJ4 181 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.022e-7■■■□□ 15.1
NIFK-201ENST00000285814 ZDHHC9Q9Y397 364 aa21.4■■□□□ 1.02
NIFK-201ENST00000285814 CDKL5O76039 1030 aa21.39■■□□□ 1.01
NIFK-201ENST00000285814 ANGEL2Q5VTE6 544 aaKnown RBP21.39■■□□□ 1.01
NIFK-201ENST00000285814 CPLX2Q6PUV4 134 aaKnown RBP21.39■■□□□ 1.01
NIFK-201ENST00000285814 BRD1O95696 1058 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 PDIA4P13667 645 aaKnown RBP21.38■■□□□ 1.01
NIFK-201ENST00000285814 PDCP20941 246 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 MAP3K14Q99558 947 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 DEFB129Q9H1M3 183 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 SCAF8Q9UPN6 1271 aaKnown RBP21.38■■□□□ 1.01
NIFK-201ENST00000285814 MPHOSPH10O00566 681 aaKnown RBP21.38■■□□□ 1.01
NIFK-201ENST00000285814 STX6O43752 255 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 TOP1P11387 765 aaKnown RBP21.38■■□□□ 1.01
NIFK-201ENST00000285814 FDPSP14324 419 aaKnown RBP21.38■■□□□ 1.01
NIFK-201ENST00000285814 IFNAR1P17181 557 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 PPP4R3BQ5MIZ7 849 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 RBM28Q9NW13 759 aaKnown RBP21.38■■□□□ 1.01
NIFK-201ENST00000285814 GGA3Q9NZ52 723 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 KIF3AQ9Y496 699 aa21.38■■□□□ 1.01
NIFK-201ENST00000285814 PITPNM2Q9BZ72 1349 aa21.37■■□□□ 1.01
NIFK-201ENST00000285814 GLTPD2A6NH11 291 aa21.37■■□□□ 1.01
NIFK-201ENST00000285814 LARP1BQ659C4 914 aaKnown RBP21.37■■□□□ 1.01
NIFK-201ENST00000285814 TMEM179Q6ZVK1 233 aa21.37■■□□□ 1.01
NIFK-201ENST00000285814 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
NIFK-201ENST00000285814 TTLL1O95922 423 aa21.36■■□□□ 1.01
NIFK-201ENST00000285814 RRP1BQ14684 758 aaKnown RBP21.36■■□□□ 1.01
NIFK-201ENST00000285814 ABCB5Q2M3G0 1257 aa21.36■■□□□ 1.01
NIFK-201ENST00000285814 FAM184AQ8NB25 1140 aa21.36■■□□□ 1.01
NIFK-201ENST00000285814 MYH4Q9Y623 1939 aa21.36■■□□□ 1.01
NIFK-201ENST00000285814 STK36Q9NRP7 1315 aa21.36■■□□□ 1.01
NIFK-201ENST00000285814 SCN4AP35499 1836 aa21.36■■□□□ 1.01
NIFK-201ENST00000285814 SHROOM1Q2M3G4 852 aaPredicted RBP21.35■■□□□ 1.01
NIFK-201ENST00000285814 CLEC10AQ8IUN9 316 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 CTCFLQ8NI51 663 aaPredicted RBP21.35■■□□□ 1.01
NIFK-201ENST00000285814 TNPO1Q92973 898 aaKnown RBP21.35■■□□□ 1.01
NIFK-201ENST00000285814 KANSL2Q9H9L4 492 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 ORC3Q9UBD5 711 aaPredicted RBP21.35■■□□□ 1.01
NIFK-201ENST00000285814 PPP2R3BQ9Y5P8 575 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 PPFIA3O75145 1194 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 GDF11O95390 407 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 GUCY1A2P33402 732 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 GRM4Q14833 912 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 MTMR6Q9Y217 621 aa21.35■■□□□ 1.01
NIFK-201ENST00000285814 WDR90Q96KV7 1748 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 KIF5BP33176 963 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 JAG1P78504 1218 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 FUT2Q10981 343 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 TMTC3Q6ZXV5 915 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 MIGA2Q7L4E1 593 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 NBPF11Q86T75 865 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 PHKBQ93100 1093 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 NYAP2Q9P242 653 aa21.34■■□□□ 1.01
NIFK-201ENST00000285814 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1.01
NIFK-201ENST00000285814 GH2P01242 217 aa21.33■■□□□ 1.01
NIFK-201ENST00000285814 ZSCAN22P10073 491 aaPredicted RBP21.33■■□□□ 1.01
NIFK-201ENST00000285814 SEPT2Q15019 361 aa21.33■■□□□ 1.01
NIFK-201ENST00000285814 CABP5Q9NP86 173 aa21.33■■□□□ 1.01
NIFK-201ENST00000285814 CLIP2Q9UDT6 1046 aa21.33■■□□□ 1.01
NIFK-201ENST00000285814 PLEKHA8P1O95397 391 aa21.32■■□□□ 1
NIFK-201ENST00000285814 MKL1Q969V6 931 aa21.32■■□□□ 1
NIFK-201ENST00000285814 ICA1Q05084 483 aa21.32■■□□□ 1
NIFK-201ENST00000285814 SSRP1Q08945 709 aaKnown RBP21.32■■□□□ 1
NIFK-201ENST00000285814 NBPF12Q5TAG4 269 aaPredicted RBP21.32■■□□□ 1
NIFK-201ENST00000285814 USP50Q70EL3 339 aaPredicted RBP21.32■■□□□ 1
NIFK-201ENST00000285814 LRRC47Q8N1G4 583 aaKnown RBP21.32■■□□□ 1
NIFK-201ENST00000285814 SLC26A6Q9BXS9 759 aa21.32■■□□□ 1
NIFK-201ENST00000285814 MAD2L2Q9UI95 211 aa21.32■■□□□ 1
NIFK-201ENST00000285814 ATAD5Q96QE3 1844 aa21.32■■□□□ 1
NIFK-201ENST00000285814 POLR2AP24928 1970 aaKnown RBP21.31■■□□□ 1
NIFK-201ENST00000285814 VPS37CA5D8V6 355 aaPredicted RBP21.31■■□□□ 1
NIFK-201ENST00000285814 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
NIFK-201ENST00000285814 EEF2P13639 858 aaKnown RBP21.31■■□□□ 1
NIFK-201ENST00000285814 EPHX2P34913 555 aa21.31■■□□□ 1
NIFK-201ENST00000285814 CAP2P40123 477 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms