RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 FAM198AQ9UFP1 575 aa22.63■■□□□ 1.21
C11orf49-201ENST00000278460 DICER1Q9UPY3 1922 aaKnown RBP22.63■■□□□ 1.21
C11orf49-201ENST00000278460 NOVP48745 357 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 TRIM29Q14134 588 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 TMTC3Q6ZXV5 915 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 BRAPQ7Z569 592 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 PNMA1Q8ND90 353 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 CFAP45Q9UL16 551 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 BCS1LQ9Y276 419 aa22.62■■□□□ 1.21
C11orf49-201ENST00000278460 ENTPD3O75355 529 aa22.61■■□□□ 1.21
C11orf49-201ENST00000278460 KRT40Q6A162 431 aa22.61■■□□□ 1.21
C11orf49-201ENST00000278460 GJB4Q9NTQ9 266 aa22.61■■□□□ 1.21
C11orf49-201ENST00000278460 PRPF3O43395 683 aaKnown RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 KIF5BP33176 963 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 KIF23Q02241 960 aaPredicted RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 JDP2Q8WYK2 163 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 PRMT6Q96LA8 375 aaPredicted RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 ZNF396Q96N95 335 aaPredicted RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 TDRD3Q9H7E2 651 aaKnown RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 TFIP11Q9UBB9 837 aaKnown RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 PLEKHA8P1O95397 391 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 CACNB3P54284 484 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 AKAP17AQ02040 695 aaKnown RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 CXCL9Q07325 125 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 GRM4Q14833 912 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 ZFPM1Q8IX07 1006 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 CMTR1Q8N1G2 835 aaKnown RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 OGFOD1Q8N543 542 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 LEO1Q8WVC0 666 aaPredicted RBP22.6■■□□□ 1.21
C11orf49-201ENST00000278460 SPATA32Q96LK8 384 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 TMEM47Q9BQJ4 181 aa22.6■■□□□ 1.21
C11orf49-201ENST00000278460 ATRNL1Q5VV63 1379 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 CNTNAP5Q8WYK1 1306 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 SPDYE2BA6NHP3 402 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 SPDYE6P0CI01 402 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 GUCY1A2P33402 732 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 SHMT1P34896 483 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 CIAPIN1Q6FI81 312 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 CAVIN1Q6NZI2 390 aaKnown RBP22.59■■□□□ 1.21
C11orf49-201ENST00000278460 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 MTMR14Q8NCE2 650 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 PI4KBQ9UBF8 816 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 STX8Q9UNK0 236 aa22.59■■□□□ 1.21
C11orf49-201ENST00000278460 UBE2Q2LH0YL09 131 aa22.58■■□□□ 1.21
C11orf49-201ENST00000278460 TCP10Q12799 353 aa22.58■■□□□ 1.21
C11orf49-201ENST00000278460 CEP95Q96GE4 821 aa22.58■■□□□ 1.21
C11orf49-201ENST00000278460 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.58■■□□□ 1.21
C11orf49-201ENST00000278460 ZBTB12Q9Y330 459 aaPredicted RBP22.58■■□□□ 1.21
C11orf49-201ENST00000278460 IGKV6D-41A0A0C4DH26 115 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 TOP1P11387 765 aaKnown RBP22.57■■□□□ 1.2
C11orf49-201ENST00000278460 GNAQP50148 359 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 DLGAP5Q15398 846 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 TMOD2Q9NZR1 351 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 DDTLA6NHG4 134 aaPredicted RBP22.57■■□□□ 1.2
C11orf49-201ENST00000278460 AKR1B1P15121 316 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 MMP14P50281 582 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 TNIP1Q15025 636 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 PKN1Q16512 942 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 SH3BP5LQ7L8J4 393 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
C11orf49-201ENST00000278460 SRBD1Q8N5C6 995 aaKnown RBP22.57■■□□□ 1.2
C11orf49-201ENST00000278460 CCDC17Q96LX7 622 aa22.57■■□□□ 1.2
C11orf49-201ENST00000278460 SBF1O95248 1867 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 KIF28PB7ZC32 967 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
C11orf49-201ENST00000278460 NLGN2Q8NFZ4 835 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 SYAP1Q96A49 352 aaPredicted RBP22.56■■□□□ 1.2
C11orf49-201ENST00000278460 USP28Q96RU2 1077 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 SPON1Q9HCB6 807 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 MTMR4Q9NYA4 1195 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 RBM27Q9P2N5 1060 aaKnown RBP22.56■■□□□ 1.2
C11orf49-201ENST00000278460 RCOR1Q9UKL0 485 aa22.56■■□□□ 1.2
C11orf49-201ENST00000278460 MMP1P03956 469 aa22.55■■□□□ 1.2
C11orf49-201ENST00000278460 XBP1P17861 261 aa22.55■■□□□ 1.2
C11orf49-201ENST00000278460 U2AF2P26368 475 aaKnown RBP eCLIP22.55■■□□□ 1.2
C11orf49-201ENST00000278460 MYSM1Q5VVJ2 828 aa22.55■■□□□ 1.2
C11orf49-201ENST00000278460 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
C11orf49-201ENST00000278460 ZSCAN29Q8IWY8 852 aaPredicted RBP22.55■■□□□ 1.2
C11orf49-201ENST00000278460 TMEM63CQ9P1W3 806 aa22.55■■□□□ 1.2
C11orf49-201ENST00000278460 V9GY48 417 aaPredicted RBP22.55■■□□□ 1.2
C11orf49-201ENST00000278460 SAFBQ15424 915 aaKnown RBP eCLIP22.54■■□□□ 1.2
C11orf49-201ENST00000278460 SPDYE2Q495Y8 402 aa22.54■■□□□ 1.2
C11orf49-201ENST00000278460 PPP4R3BQ5MIZ7 849 aa22.54■■□□□ 1.2
C11orf49-201ENST00000278460 FKBP1CQ5VVH2 108 aa22.54■■□□□ 1.2
C11orf49-201ENST00000278460 DNAJC18Q9H819 358 aa22.54■■□□□ 1.2
C11orf49-201ENST00000278460 ZNF70Q9UC06 446 aaPredicted RBP22.54■■□□□ 1.2
C11orf49-201ENST00000278460 MAD2L2Q9UI95 211 aa22.54■■□□□ 1.2
C11orf49-201ENST00000278460 PALM3A6NDB9 673 aaPredicted RBP22.53■■□□□ 1.2
C11orf49-201ENST00000278460 ZSCAN23Q3MJ62 389 aa22.53■■□□□ 1.2
C11orf49-201ENST00000278460 LZTS2Q9BRK4 669 aa22.53■■□□□ 1.2
C11orf49-201ENST00000278460 RTEL1Q9NZ71 1219 aa22.53■■□□□ 1.2
C11orf49-201ENST00000278460 RPS12P25398 132 aaKnown RBP22.53■■□□□ 1.2
C11orf49-201ENST00000278460 ZNF445P59923 1031 aa22.53■■□□□ 1.2
C11orf49-201ENST00000278460 GNL2Q13823 731 aaKnown RBP22.53■■□□□ 1.2
C11orf49-201ENST00000278460 ZBED3Q96IU2 234 aaPredicted RBP22.53■■□□□ 1.2
C11orf49-201ENST00000278460 ISY1Q9ULR0 285 aaKnown RBP22.53■■□□□ 1.2
C11orf49-201ENST00000278460 RASSF7Q02833 373 aa22.52■■□□□ 1.2
C11orf49-201ENST00000278460 TATDN1Q6P1N9 297 aa22.52■■□□□ 1.2
C11orf49-201ENST00000278460 STAG2Q8N3U4 1231 aa22.52■■□□□ 1.2
C11orf49-201ENST00000278460 TRIM34Q9BYJ4 488 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms