RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 NFIAQ12857 509 aa23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 NEDD1Q8NHV4 660 aa23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 SGIP1Q9BQI5 828 aa23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 PPP1R1BQ9UD71 204 aaPredicted RBP23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 MYH6P13533 1939 aa23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
LYSMD2-201ENST00000267838 PLEKHA8P1O95397 391 aa23.83■■□□□ 1.41
LYSMD2-201ENST00000267838 FUT2Q10981 343 aa23.83■■□□□ 1.41
LYSMD2-201ENST00000267838 RSBN1LQ6PCB5 846 aaPredicted RBP23.83■■□□□ 1.41
LYSMD2-201ENST00000267838 TMTC3Q6ZXV5 915 aa23.83■■□□□ 1.41
LYSMD2-201ENST00000267838 SYAP1Q96A49 352 aaPredicted RBP23.83■■□□□ 1.41
LYSMD2-201ENST00000267838 KIF28PB7ZC32 967 aa23.83■■□□□ 1.4
LYSMD2-201ENST00000267838 TPRNQ4KMQ1 711 aa23.83■■□□□ 1.4
LYSMD2-201ENST00000267838 PNMA1Q8ND90 353 aa23.83■■□□□ 1.4
LYSMD2-201ENST00000267838 TAOK2Q9UL54 1235 aa23.83■■□□□ 1.4
LYSMD2-201ENST00000267838 MYH8P13535 1937 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 RAD17O75943 681 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 HLA-DOAP06340 250 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 VIL1P09327 827 aaKnown RBP23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 AKAP17AQ02040 695 aaKnown RBP23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 USP28Q96RU2 1077 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 MAP3K14Q99558 947 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 IDI2Q9BXS1 227 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 SWAP70Q9UH65 585 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 SERPINB13Q9UIV8 391 aa23.82■■□□□ 1.4
LYSMD2-201ENST00000267838 PSMD14O00487 310 aa23.81■■□□□ 1.4
LYSMD2-201ENST00000267838 PRPF3O43395 683 aaKnown RBP23.81■■□□□ 1.4
LYSMD2-201ENST00000267838 FER1L6Q2WGJ9 1857 aa23.81■■□□□ 1.4
LYSMD2-201ENST00000267838 CFAP100Q494V2 611 aa23.81■■□□□ 1.4
LYSMD2-201ENST00000267838 NIM1KQ8IY84 436 aa23.81■■□□□ 1.4
LYSMD2-201ENST00000267838 CD2APQ9Y5K6 639 aa23.81■■□□□ 1.4
LYSMD2-201ENST00000267838 KIF5BP33176 963 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 CACNB3P54284 484 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 CEBPZQ03701 1054 aaKnown RBP23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 HS1BP3Q53T59 392 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 TMEM47Q9BQJ4 181 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 RCOR1Q9UKL0 485 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 ZNRF3Q9ULT6 936 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 STX8Q9UNK0 236 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 PLIN4Q96Q06 1357 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 NPM3O75607 178 aaKnown RBP23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 KLHL34Q8N239 644 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 FTOQ9C0B1 505 aaKnown RBP eCLIP23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 FAM198AQ9UFP1 575 aa23.8■■□□□ 1.4
LYSMD2-201ENST00000267838 CNTNAP5Q8WYK1 1306 aa23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 MYSM1Q5VVJ2 828 aa23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 ZFPM1Q8IX07 1006 aa23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 SRBD1Q8N5C6 995 aaKnown RBP23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 NAP1L5Q96NT1 182 aaPredicted RBP23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 EHD4Q9H223 541 aa23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 DHX36Q9H2U1 1008 aaKnown RBP23.79■■□□□ 1.4
LYSMD2-201ENST00000267838 GOLGA6L4A6NEF3 574 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 MMP1P03956 469 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 TCP10Q12799 353 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 GNL2Q13823 731 aaKnown RBP23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 GRM4Q14833 912 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 PKN1Q16512 942 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 GMLQ99445 158 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 TAOK3Q9H2K8 898 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 V9GY48 417 aaPredicted RBP23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 U2AF2P26368 475 aaKnown RBP eCLIP23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 LRSAM1Q6UWE0 723 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 CEP95Q96GE4 821 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 TDRD3Q9H7E2 651 aaKnown RBP23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 RTEL1Q9NZ71 1219 aa23.78■■□□□ 1.4
LYSMD2-201ENST00000267838 PTGER2P43116 358 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 NOVP48745 357 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 ZSCAN30Q86W11 494 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 PGBD1Q96JS3 809 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 PRMT6Q96LA8 375 aaPredicted RBP23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 HDAC9Q9UKV0 1011 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 KCNJ14Q9UNX9 436 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 SIPA1L1O43166 1804 aa23.77■■□□□ 1.4
LYSMD2-201ENST00000267838 AKR1B1P15121 316 aa23.76■■□□□ 1.39
LYSMD2-201ENST00000267838 XBP1P17861 261 aa23.76■■□□□ 1.39
LYSMD2-201ENST00000267838 SHMT1P34896 483 aa23.76■■□□□ 1.39
LYSMD2-201ENST00000267838 CCDC183Q5T5S1 534 aa23.76■■□□□ 1.39
LYSMD2-201ENST00000267838 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.76■■□□□ 1.39
LYSMD2-201ENST00000267838 SYCE3A1L190 88 aa23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 TOP1P11387 765 aaKnown RBP23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 POLR3EQ9NVU0 708 aa23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 MAD2L2Q9UI95 211 aa23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 hCG_1642624A0A1W2PR95 340 aa23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 DDTLA6NHG4 134 aaPredicted RBP23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 GNAQP50148 359 aa23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 BCS1LQ9Y276 419 aa23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 ZBTB12Q9Y330 459 aaPredicted RBP23.75■■□□□ 1.39
LYSMD2-201ENST00000267838 IGKV6D-41A0A0C4DH26 115 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 NFKBIEO00221 500 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 ENTPD3O75355 529 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 SH3BP5LQ7L8J4 393 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 DIS3L2Q8IYB7 885 aaKnown RBP23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 STAG2Q8N3U4 1231 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 OGFOD1Q8N543 542 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 AGBL3Q8NEM8 1001 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 MTMR4Q9NYA4 1195 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 PI4KBQ9UBF8 816 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 CLIC4Q9Y696 253 aa23.74■■□□□ 1.39
LYSMD2-201ENST00000267838 SPDYE2BA6NHP3 402 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms