RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 FANCBQ8NB91 859 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 IFT81Q8WYA0 676 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 MAPK8IP1Q9UQF2 711 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 GNA14O95837 355 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 IRX3P78415 501 aaPredicted RBP21.12■□□□□ 0.97
PTPRE-201ENST00000254667 NOSTRINQ8IVI9 506 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 ATRIPQ8WXE1 791 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 BCAMP50895 628 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 FBF1Q8TES7 1133 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 CCDC114Q96M63 670 aa21.12■□□□□ 0.97
PTPRE-201ENST00000254667 MED23Q9ULK4 1368 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 DCAF15Q66K64 600 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 BLIDQ8IZY5 108 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 GPR161Q8N6U8 529 aaKnown RBP21.11■□□□□ 0.97
PTPRE-201ENST00000254667 UBL4BQ8N7F7 174 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 ANKARQ7Z5J8 1434 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 EXOC3O60645 756 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 TRPC5Q9UL62 973 aaPredicted RBP21.11■□□□□ 0.97
PTPRE-201ENST00000254667 LRRC24Q50LG9 513 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 NELFBQ8WX92 580 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 PSMD1Q99460 953 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 WDR17Q8IZU2 1322 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 CEP63Q96MT8 703 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 LEMD3Q9Y2U8 911 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 ATP10DQ9P241 1426 aa21.11■□□□□ 0.97
PTPRE-201ENST00000254667 ARHGAP6O43182 974 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 RHOXF2BP0C7M4 288 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
PTPRE-201ENST00000254667 CLUL1Q15846 466 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 C2CD5Q86YS7 1000 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 ERO1AQ96HE7 468 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 RHOXF2Q9BQY4 288 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 BIN2Q9UBW5 565 aaPredicted RBP21.1■□□□□ 0.97
PTPRE-201ENST00000254667 FAM169AQ9Y6X4 670 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 TNKSO95271 1327 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 BCRP11274 1271 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 PTH1RQ03431 593 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 CFAP58Q5T655 872 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 OTUD6AQ7L8S5 288 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPRE-201ENST00000254667 GNPTABQ3T906 1256 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 DYMQ7RTS9 669 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 MRPL44Q9H9J2 332 aaKnown RBP21.1■□□□□ 0.97
PTPRE-201ENST00000254667 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
PTPRE-201ENST00000254667 CCDC63Q8NA47 563 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 PNMA1Q8ND90 353 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 LMBRD1Q9NUN5 540 aa21.1■□□□□ 0.97
PTPRE-201ENST00000254667 DDX39AO00148 427 aaKnown RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 ZNF804BA4D1E1 1349 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 ZNF408Q9H9D4 720 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 MRPL11Q9Y3B7 192 aaKnown RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 KDM5CP41229 1560 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 GCNT3O95395 438 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 GAS8O95995 478 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 MRPS9P82933 396 aaKnown RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 INF2Q27J81 1249 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 USPL1Q5W0Q7 1092 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 HDXQ7Z353 690 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 SECISBP2LQ93073 1101 aaKnown RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 SELENOSQ9BQE4 189 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 AGTPBP1Q9UPW5 1226 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 CSADQ9Y600 493 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 XDHP47989 1333 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 ACTN4O43707 911 aaKnown RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 GAS7O60861 476 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 ERCC5P28715 1186 aaPredicted RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 PPP2R3AQ06190 1150 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 GREM2Q9H772 168 aa21.09■□□□□ 0.97
PTPRE-201ENST00000254667 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 V9GYY5 206 aaPredicted RBP21.09■□□□□ 0.97
PTPRE-201ENST00000254667 FLOT1O75955 427 aa21.08■□□□□ 0.97
PTPRE-201ENST00000254667 KIFC2Q96AC6 838 aa21.08■□□□□ 0.97
PTPRE-201ENST00000254667 FGAP02671 866 aa21.08■□□□□ 0.97
PTPRE-201ENST00000254667 TRIM6Q9C030 488 aaPredicted RBP21.08■□□□□ 0.97
PTPRE-201ENST00000254667 ATP5DP30049 168 aa21.08■□□□□ 0.97
PTPRE-201ENST00000254667 BTDP43251 543 aa21.08■□□□□ 0.97
PTPRE-201ENST00000254667 ROBO2Q9HCK4 1378 aa21.08■□□□□ 0.96
PTPRE-201ENST00000254667 KRT9P35527 623 aa21.08■□□□□ 0.96
PTPRE-201ENST00000254667 SLFN12Q8IYM2 578 aa21.08■□□□□ 0.96
PTPRE-201ENST00000254667 OSBPL3Q9H4L5 887 aa21.08■□□□□ 0.96
PTPRE-201ENST00000254667 TAB2Q9NYJ8 693 aa21.08■□□□□ 0.96
PTPRE-201ENST00000254667 TSKSQ9UJT2 592 aa21.08■□□□□ 0.96
PTPRE-201ENST00000254667 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 PSTPIP2Q9H939 334 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 ADCY9O60503 1353 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 SCG2P13521 617 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 CCDC51Q96ER9 411 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 ALDH3A1P30838 453 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 EVCP57679 992 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 CERKLQ49MI3 558 aaPredicted RBP21.07■□□□□ 0.96
PTPRE-201ENST00000254667 CCDC25Q86WR0 208 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 SLC5A4Q9NY91 659 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 SERTAD1Q9UHV2 236 aa21.07■□□□□ 0.96
PTPRE-201ENST00000254667 hCG_1642624A0A1W2PR95 340 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 NDC80O14777 642 aa21.06■□□□□ 0.96
PTPRE-201ENST00000254667 GADD45BO75293 160 aaPredicted RBP21.06■□□□□ 0.96
PTPRE-201ENST00000254667 ARL1P40616 181 aaPredicted RBP21.06■□□□□ 0.96
PTPRE-201ENST00000254667 MAGEA1P43355 309 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 413.5 ms