RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 UBXN4Q92575 508 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 ARMT1Q9H993 441 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 SOWAHDA6NJG2 315 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 PRKAB2O43741 272 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 URI1O94763 535 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 USP5P45974 858 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 SSRP1Q08945 709 aaKnown RBP13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 RILPL1Q5EBL4 403 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 RAI14Q9P0K7 980 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 LRP2BPQ9P2M1 347 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
SEC61A1-201ENST00000243253 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 CAPN2P17655 700 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 RABGGTAQ92696 567 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 STAMQ92783 540 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 AATFQ9NY61 560 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 GOLGA6L9A6NEM1 432 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 LRRC10BA6NIK2 292 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 MSL3Q8N5Y2 521 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 MAGEB6Q8N7X4 407 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 SPATA5Q8NB90 893 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 MTRQ99707 1265 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 E2F4Q16254 413 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 ZNF34Q8IZ26 560 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 LCORLQ8N3X6 602 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 HNRNPLLQ8WVV9 542 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-201ENST00000243253 LPIN2Q92539 896 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 ANAPC4Q9UJX5 808 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 COL5A3P25940 1745 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 H3BQF6 201 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 TPM1P09493 284 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 TMCO3Q6UWJ1 677 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 MSANTD4Q8NCY6 345 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 GYPCP04921 128 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 FGRP09769 529 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 RBL2Q08999 1139 aa13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
SEC61A1-201ENST00000243253 ITIH6Q6UXX5 1313 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 ZBTB22O15209 634 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 MBD4O95243 580 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 DEXIO95424 95 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 CASQ1P31415 396 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 CPLX3Q8WVH0 158 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 NAPBQ9H115 298 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 RAD21O60216 631 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 STARD3NLO95772 234 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 TXLNAP40222 546 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 TRIM29Q14134 588 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 BEND6Q5SZJ8 279 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 SDR42E1Q8WUS8 393 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 EEF2KMTQ96G04 330 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 CNNM2Q9H8M5 875 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 ADAMTS3O15072 1205 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 UQCRFS1P1P0C7P4 283 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 GNG11P61952 73 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 IL17AQ16552 155 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 MAST2Q6P0Q8 1798 aa13.62□□□□□ -0.23
SEC61A1-201ENST00000243253 PDE8AO60658 829 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 SPATA1Q5VX52 437 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 PNKPQ96T60 521 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 KRT23Q9C075 422 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 SEMA3EO15041 775 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 MFAP3LO75121 409 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 CASP1P29466 404 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 BCAMP50895 628 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 AMPD2Q01433 879 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 UIMC1Q96RL1 719 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
SEC61A1-201ENST00000243253 XDHP47989 1333 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 279.7 ms