RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RTP1P59025 263 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 GJC2Q5T442 439 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-201ENST00000242776 ZNF697Q5TEC3 545 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-201ENST00000242776 PRKAG2Q9UGJ0 569 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 DDX20Q9UHI6 824 aaKnown RBP16.87■□□□□ 0.29
DDX39A-201ENST00000242776 LTBP2Q14767 1821 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
DDX39A-201ENST00000242776 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-201ENST00000242776 ZAP70P43403 619 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-201ENST00000242776 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
DDX39A-201ENST00000242776 GNAI2P04899 355 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 CYP7A1P22680 504 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 PTPREP23469 700 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP5P45974 858 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 PPP4CP60510 307 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 CCNA1P78396 465 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 MTX1Q13505 466 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 CCDC158Q5M9N0 1113 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 GTF3C2Q8WUA4 911 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-201ENST00000242776 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 BTBD7Q9P203 1132 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 RABGAP1Q9Y3P9 1069 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 IVNS1ABPQ9Y6Y0 642 aa16.86■□□□□ 0.29
DDX39A-201ENST00000242776 RLFQ13129 1914 aa16.85■□□□□ 0.29
DDX39A-201ENST00000242776 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
DDX39A-201ENST00000242776 SHHQ15465 462 aa16.85■□□□□ 0.29
DDX39A-201ENST00000242776 TNNI3KQ59H18 835 aa16.85■□□□□ 0.29
DDX39A-201ENST00000242776 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
DDX39A-201ENST00000242776 TRPV1Q8NER1 839 aa16.85■□□□□ 0.29
DDX39A-201ENST00000242776 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-201ENST00000242776 FPGT-TNNI3KV9GXZ4 949 aa16.85■□□□□ 0.29
DDX39A-201ENST00000242776 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
DDX39A-201ENST00000242776 C9orf50Q5SZB4 431 aa16.84■□□□□ 0.29
DDX39A-201ENST00000242776 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
DDX39A-201ENST00000242776 CATSPERGQ6ZRH7 1159 aa16.84■□□□□ 0.29
DDX39A-201ENST00000242776 LPAR1Q92633 364 aa16.84■□□□□ 0.29
DDX39A-201ENST00000242776 CDX2Q99626 313 aaPredicted RBP16.84■□□□□ 0.29
DDX39A-201ENST00000242776 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
DDX39A-201ENST00000242776 VCAM1P19320 739 aa16.83■□□□□ 0.28
DDX39A-201ENST00000242776 FAM109BQ6ICB4 259 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-201ENST00000242776 MYLIPQ8WY64 445 aa16.83■□□□□ 0.28
DDX39A-201ENST00000242776 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-201ENST00000242776 GINM1Q9NU53 330 aa16.83■□□□□ 0.28
DDX39A-201ENST00000242776 DNM1LO00429 736 aa16.82■□□□□ 0.28
DDX39A-201ENST00000242776 ABCB5Q2M3G0 1257 aa16.82■□□□□ 0.28
DDX39A-201ENST00000242776 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-201ENST00000242776 DPP9Q86TI2 863 aa16.82■□□□□ 0.28
DDX39A-201ENST00000242776 MAFAQ8NHW3 353 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-201ENST00000242776 BADQ92934 168 aa16.82■□□□□ 0.28
DDX39A-201ENST00000242776 FERMT2Q96AC1 680 aa16.82■□□□□ 0.28
DDX39A-201ENST00000242776 TLR7Q9NYK1 1049 aaKnown RBP16.82■□□□□ 0.28
DDX39A-201ENST00000242776 VCANP13611 3396 aa16.82■□□□□ 0.28
DDX39A-201ENST00000242776 GRB14Q14449 540 aa16.81■□□□□ 0.28
DDX39A-201ENST00000242776 TRIM60Q495X7 471 aa16.81■□□□□ 0.28
DDX39A-201ENST00000242776 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-201ENST00000242776 PRAMEF19Q5SWL8 479 aa16.81■□□□□ 0.28
DDX39A-201ENST00000242776 MAGEB6Q8N7X4 407 aa16.81■□□□□ 0.28
DDX39A-201ENST00000242776 C12orf42Q96LP6 360 aa16.81■□□□□ 0.28
DDX39A-201ENST00000242776 CCDC8Q9H0W5 538 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-201ENST00000242776 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
DDX39A-201ENST00000242776 SPDYE16A6NNV3 312 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-201ENST00000242776 KBTBD13C9JR72 458 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 MSCO60682 206 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 BCAR3O75815 825 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 USP14P54578 494 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 SLC39A5Q6ZMH5 540 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 SEMA6BQ9H3T3 888 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 RCAN3Q9UKA8 241 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
DDX39A-201ENST00000242776 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
DDX39A-201ENST00000242776 CYBAP13498 195 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 TRIM27P14373 513 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 ADORA2AP29274 412 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 ADCYAP1R1P41586 468 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 EVX2Q03828 476 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 TATDN1Q6P1N9 297 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 SH3RF1Q7Z6J0 888 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 KIAA1683Q9H0B3 1180 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 PRUNE2Q8WUY3 3088 aa16.8■□□□□ 0.28
DDX39A-201ENST00000242776 NAV1Q8NEY1 1877 aa16.79■□□□□ 0.28
DDX39A-201ENST00000242776 ZNFX1Q9P2E3 1918 aaKnown RBP16.79■□□□□ 0.28
DDX39A-201ENST00000242776 SMCHD1A6NHR9 2005 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms