RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SPZ1Q9BXG8 430 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 AGTPBP1Q9UPW5 1226 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 ADKP55263 362 aaKnown RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 IL9RQ01113 521 aa9.08□□□□□ -0.96
APOB-201ENST00000233242 EPN1Q9Y6I3 576 aaPredicted RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.08□□□□□ -0.96
APOB-201ENST00000233242 DEUP1Q05D60 604 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 SPATA1Q5VX52 437 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 DIS3L2Q8IYB7 885 aaKnown RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 MTMR6Q9Y217 621 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 PER1O15534 1290 aaPredicted RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 KRT40Q6A162 431 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 ZNF274Q96GC6 653 aaPredicted RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 DSCC1Q9BVC3 393 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 MORC3Q14149 939 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 PFKFB1P16118 471 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 PDE1CQ14123 709 aaPredicted RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 EMBQ6PCB8 327 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 NR1I2O75469 434 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 GUCY2FP51841 1108 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 ZBTB3Q9H5J0 574 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 PHF8Q9UPP1 1060 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 MAP3K5Q99683 1374 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 PPP2R5AQ15172 486 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 CCDC89Q8N998 374 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 UGGT2Q9NYU1 1516 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 KIFC2Q96AC6 838 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 RIC8AQ9NPQ8 531 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 PYCARDQ9ULZ3 195 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 RNASE9P60153 205 aaKnown RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 N4BP2L2Q92802 583 aaPredicted RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 ARHGAP42A6NI28 874 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 EIF3BP55884 814 aaKnown RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 RRAGAQ7L523 313 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 AKAP4Q5JQC9 854 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 NOP53Q9NZM5 478 aaKnown RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
APOB-201ENST00000233242 FBXO18Q8NFZ0 1043 aa9.07□□□□□ -0.96
APOB-201ENST00000233242 FLT4P35916 1363 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 NBPF10Q6P3W6 841 aaKnown RBP9.06□□□□□ -0.96
APOB-201ENST00000233242 CCDC13Q8IYE1 715 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 ESRRGP62508 458 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
APOB-201ENST00000233242 PARP1P09874 1014 aaKnown RBP9.06□□□□□ -0.96
APOB-201ENST00000233242 PRR16Q569H4 304 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 CREB3O43889 395 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 GDAP1L1Q96MZ0 367 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 RNF8O76064 485 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 LMNAP02545 664 aaKnown RBP9.06□□□□□ -0.96
APOB-201ENST00000233242 COPS6Q7L5N1 327 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 DESI2Q9BSY9 194 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 PPP1R21Q6ZMI0 780 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 ZNF526Q8TF50 670 aaPredicted RBP9.06□□□□□ -0.96
APOB-201ENST00000233242 MRPS9P82933 396 aaKnown RBP9.06□□□□□ -0.96
APOB-201ENST00000233242 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 TRIM35Q9UPQ4 493 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 KIAA0232Q92628 1395 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 TSPYL6Q8N831 410 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 CFAP61Q8NHU2 1237 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 RILPQ96NA2 401 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 GIPC1O14908 333 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 RIMS2Q9UQ26 1411 aa9.06□□□□□ -0.96
APOB-201ENST00000233242 PFKFB2O60825 505 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 TFCP2Q12800 502 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 OTUD7AQ8TE49 926 aaPredicted RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 VPS37BQ9H9H4 285 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 PPIP5K1Q6PFW1 1433 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 KBTBD3Q8NAB2 608 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ANGPTL2Q9UKU9 493 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 NT5C3AQ9H0P0 336 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 KCNG1Q9UIX4 513 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 APPBP2Q92624 585 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 INTS9Q9NV88 658 aaKnown RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 RTEL1Q9NZ71 1219 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 THAP12O43422 761 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 CPA1P15085 419 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 HSPA6P17066 643 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 EEF1GP26641 437 aaKnown RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 FBXO38Q6PIJ6 1188 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 CHST3Q7LGC8 479 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 NOSTRINQ8IVI9 506 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 PANX2Q96RD6 677 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 TBC1D8O95759 1140 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 USHBP1Q8N6Y0 703 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ANKRD42Q8N9B4 389 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ZSWIM6Q9HCJ5 1215 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 PA2G4Q9UQ80 394 aaKnown RBP9.05□□□□□ -0.96
APOB-201ENST00000233242 ATP5HO75947 161 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 ME3Q16798 604 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 MAGEB6Q8N7X4 407 aa9.05□□□□□ -0.96
APOB-201ENST00000233242 TSC22D3Q99576 134 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms