RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 TBC1D16Q8TBP0 767 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZNF384Q8TF68 577 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZNF274Q96GC6 653 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 STK32BQ9NY57 414 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ANGEL1Q9UNK9 670 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZMYM6O95789 1325 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 NEDD4P46934 1319 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PDS5AQ29RF7 1337 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 SPDYE5A6NIY4 337 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 GOLGA8BA8MQT2 603 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 H3BQV1 296 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 RIMBP2O15034 1052 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 USP17L8P0C7I0 530 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 BAG6P46379 1132 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ANTXR2P58335 489 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 PPARAQ07869 468 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 IFFO2Q5TF58 517 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 NFXL1Q6ZNB6 911 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 CDC37L1Q7L3B6 337 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ARMCX6Q7L4S7 300 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 DEFB132Q7Z7B7 95 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 NBPF11Q86T75 865 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 CAMKK2Q96RR4 588 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZC3H12CQ9C0D7 883 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 CNNM2Q9H8M5 875 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 LMBRD1Q9NUN5 540 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 ZSWIM5Q9P217 1185 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 MTMR6Q9Y217 621 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 FAN1Q9Y2M0 1017 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 KIF3AQ9Y496 699 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 BAZ2AQ9UIF9 1905 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-201ENST00000231526 G3V3G9 751 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 IFIT3O14879 490 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 NUDT7P0C024 238 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 COL9A1P20849 921 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 HMGN5P82970 282 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 DIXDC1Q155Q3 683 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 KLHL40Q2TBA0 621 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 NOM1Q5C9Z4 860 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 MFSD14BQ5SR56 506 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 DPP8Q6V1X1 898 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CYB5R4Q7L1T6 521 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 MICU3Q86XE3 530 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 SP8Q8IXZ3 490 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 DEPDC4Q8N2C3 294 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 FBXL16Q8N461 479 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 MPNDQ8N594 471 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 MASTLQ96GX5 879 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 ZKSCAN3Q9BRR0 538 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 ADAM33Q9BZ11 813 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CRNKL1Q9BZJ0 848 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 KRT23Q9C075 422 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 RNF41Q9H4P4 317 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 PCDHGC3Q9UN70 934 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 ATP6V0A2Q9Y487 856 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CACNA1SQ13698 1873 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CCDC88AQ3V6T2 1871 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 ERICH2A1L162 156 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 PTPDC1A2A3K4 754 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 USP17L12C9JPN9 530 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 USP17L21D6R901 530 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 H0YIN7 160 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 FIBPO43427 364 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 DHX16O60231 1041 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 RXRAP19793 462 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 SLC4A8Q2Y0W8 1093 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CAVIN1Q6NZI2 390 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 NSUN7Q8NE18 718 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 NKX2-3Q8TAU0 364 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 STAG1Q8WVM7 1258 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CHMP4CQ96CF2 233 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 TMEM87BQ96K49 555 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 LLPHQ9BRT6 129 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 NOL10Q9BSC4 688 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CYP2D7A0A087X1C5 515 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 BAG3O95817 575 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 USP5P45974 858 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 DNM1Q05193 864 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 C15orf52Q6ZUT6 534 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CCDC144CPQ8IYA2 1237 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 MCM9Q9NXL9 1143 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CNPY2Q9Y2B0 182 aa6.27□□□□□ -1.41
TRAPPC13-201ENST00000231526 CHD4Q14839 1912 aa6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 WDR19Q8NEZ3 1342 aa6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 CCDC69A6NI79 296 aa6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 HMGB1P1B2RPK0 211 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 RANBP6O60518 1105 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 PRDM1O75626 825 aa6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 CTDNEP1O95476 244 aa6.26□□□□□ -1.41
TRAPPC13-201ENST00000231526 LDHCP07864 332 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms