RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
CTSC-201ENST00000227266 ZBTB21Q9ULJ3 1066 aa13.05□□□□□ -0.32
CTSC-201ENST00000227266 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
CTSC-201ENST00000227266 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 SEC23AQ15436 765 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
CTSC-201ENST00000227266 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 ASNSP08243 561 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 LIFRP42702 1097 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
CTSC-201ENST00000227266 ICA1Q05084 483 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 RCSD1Q6JBY9 416 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 DGKHQ86XP1 1220 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 SNX21Q969T3 373 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 TPCN1Q9ULQ1 816 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 LIMCH1Q9UPQ0 1083 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
CTSC-201ENST00000227266 CELF2O95319 508 aaKnown RBP13.03□□□□□ -0.32
CTSC-201ENST00000227266 TTLL1O95922 423 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 MCM2P49736 904 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
CTSC-201ENST00000227266 TMTC2Q8N394 836 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
CTSC-201ENST00000227266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■□□□ 13.8
CTSC-201ENST00000227266 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 PICK1Q9NRD5 415 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 SLC12A7Q9Y666 1083 aa13.03□□□□□ -0.32
CTSC-201ENST00000227266 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.32
CTSC-201ENST00000227266 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.32
CTSC-201ENST00000227266 MAP3K9P80192 1104 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 STK3Q13188 491 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 SCYL3Q8IZE3 742 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 MYL10Q9BUA6 226 aa13.02□□□□□ -0.32
CTSC-201ENST00000227266 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 LARGE1O95461 756 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 RXRAP19793 462 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 VGLL4Q14135 290 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
CTSC-201ENST00000227266 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
CTSC-201ENST00000227266 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 CSADQ9Y600 493 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
CTSC-201ENST00000227266 RAD21O60216 631 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
CTSC-201ENST00000227266 ME3Q16798 604 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 APOA5Q6Q788 366 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 ZNF654Q8IZM8 581 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 PNMA1Q8ND90 353 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 NUP133Q8WUM0 1156 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
CTSC-201ENST00000227266 USP17L5A8MUK1 530 aa13□□□□□ -0.33
CTSC-201ENST00000227266 ZBTB43O43298 467 aa13□□□□□ -0.33
CTSC-201ENST00000227266 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
CTSC-201ENST00000227266 NOVP48745 357 aa13□□□□□ -0.33
CTSC-201ENST00000227266 ANKRD13AQ8IZ07 590 aa13□□□□□ -0.33
CTSC-201ENST00000227266 NECAB1Q8N987 351 aa13□□□□□ -0.33
CTSC-201ENST00000227266 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
CTSC-201ENST00000227266 ACER1Q8TDN7 264 aa13□□□□□ -0.33
CTSC-201ENST00000227266 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
CTSC-201ENST00000227266 ZSCAN31Q96LW9 406 aaPredicted RBP13□□□□□ -0.33
CTSC-201ENST00000227266 SLKQ9H2G2 1235 aaPredicted RBP13□□□□□ -0.33
CTSC-201ENST00000227266 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
CTSC-201ENST00000227266 GBA2Q9HCG7 927 aaPredicted RBP13□□□□□ -0.33
CTSC-201ENST00000227266 GINM1Q9NU53 330 aa13□□□□□ -0.33
CTSC-201ENST00000227266 A0A1W2PRG0 241 aa13□□□□□ -0.33
CTSC-201ENST00000227266 TOMM70O94826 608 aa13□□□□□ -0.33
CTSC-201ENST00000227266 PTPRAP18433 802 aa13□□□□□ -0.33
CTSC-201ENST00000227266 ECE1P42892 770 aa13□□□□□ -0.33
CTSC-201ENST00000227266 EVCP57679 992 aa13□□□□□ -0.33
CTSC-201ENST00000227266 CCT2P78371 535 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms