RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 TNIP1Q15025 636 aa19.51■□□□□ 0.71
TVP23C-201ENST00000225576 DLGAP5Q15398 846 aa19.51■□□□□ 0.71
TVP23C-201ENST00000225576 FAM173BQ6P4H8 233 aa19.51■□□□□ 0.71
TVP23C-201ENST00000225576 PNMA1Q8ND90 353 aa19.51■□□□□ 0.71
TVP23C-201ENST00000225576 NLGN2Q8NFZ4 835 aa19.51■□□□□ 0.71
TVP23C-201ENST00000225576 SCAND2PQ9GZW5 306 aaPredicted RBP19.51■□□□□ 0.71
TVP23C-201ENST00000225576 PI4KBQ9UBF8 816 aa19.51■□□□□ 0.71
TVP23C-201ENST00000225576 ZBTB12Q9Y330 459 aaPredicted RBP19.51■□□□□ 0.71
TVP23C-201ENST00000225576 FIBPO43427 364 aa19.5■□□□□ 0.71
TVP23C-201ENST00000225576 OTUD7BQ6GQQ9 843 aa19.5■□□□□ 0.71
TVP23C-201ENST00000225576 TMTC3Q6ZXV5 915 aa19.5■□□□□ 0.71
TVP23C-201ENST00000225576 FOXP4Q8IVH2 680 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-201ENST00000225576 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
TVP23C-201ENST00000225576 TMEM47Q9BQJ4 181 aa19.5■□□□□ 0.71
TVP23C-201ENST00000225576 ECM29Q5VYK3 1845 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 COL2A1P02458 1487 aaPredicted RBP19.49■□□□□ 0.71
TVP23C-201ENST00000225576 ATRNL1Q5VV63 1379 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 PRPF3O43395 683 aaKnown RBP19.49■□□□□ 0.71
TVP23C-201ENST00000225576 SHMT1P34896 483 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 TCP10Q12799 353 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 TRIM29Q14134 588 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 KRT40Q6A162 431 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 BRAPQ7Z569 592 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 GPT2Q8TD30 523 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 CCDC17Q96LX7 622 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 TMOD2Q9NZR1 351 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 CFAP45Q9UL16 551 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 STX8Q9UNK0 236 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 ELP1O95163 1332 aa19.49■□□□□ 0.71
TVP23C-201ENST00000225576 IGKV6D-41A0A0C4DH26 115 aa19.48■□□□□ 0.71
TVP23C-201ENST00000225576 DDTLA6NHG4 134 aaPredicted RBP19.48■□□□□ 0.71
TVP23C-201ENST00000225576 TOP1P11387 765 aaKnown RBP19.48■□□□□ 0.71
TVP23C-201ENST00000225576 AKAP17AQ02040 695 aaKnown RBP19.48■□□□□ 0.71
TVP23C-201ENST00000225576 SH3BP5LQ7L8J4 393 aa19.48■□□□□ 0.71
TVP23C-201ENST00000225576 METTL16Q86W50 562 aaKnown RBP19.48■□□□□ 0.71
TVP23C-201ENST00000225576 CMTR1Q8N1G2 835 aaKnown RBP19.48■□□□□ 0.71
TVP23C-201ENST00000225576 CEP95Q96GE4 821 aa19.48■□□□□ 0.71
TVP23C-201ENST00000225576 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.48■□□□□ 0.71
TVP23C-201ENST00000225576 PLEKHA8P1O95397 391 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 RPS12P25398 132 aaKnown RBP19.47■□□□□ 0.71
TVP23C-201ENST00000225576 GUCY1A2P33402 732 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 GNAQP50148 359 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 UBE2HP62256 183 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 GRM4Q14833 912 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 FKBP1CQ5VVH2 108 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 CCDC82Q8N4S0 544 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 ZNF396Q96N95 335 aaPredicted RBP19.47■□□□□ 0.71
TVP23C-201ENST00000225576 GJB4Q9NTQ9 266 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 MTMR4Q9NYA4 1195 aa19.47■□□□□ 0.71
TVP23C-201ENST00000225576 GADD45BO75293 160 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 AKR1B1P15121 316 aa19.46■□□□□ 0.71
TVP23C-201ENST00000225576 KIF23Q02241 960 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 SPDYE2Q495Y8 402 aa19.46■□□□□ 0.71
TVP23C-201ENST00000225576 PPP4R3BQ5MIZ7 849 aa19.46■□□□□ 0.71
TVP23C-201ENST00000225576 ZSCAN29Q8IWY8 852 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 SRBD1Q8N5C6 995 aaKnown RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 ZBED3Q96IU2 234 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 TFIP11Q9UBB9 837 aaKnown RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 ZNF70Q9UC06 446 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
TVP23C-201ENST00000225576 FZD9O00144 591 aa19.46■□□□□ 0.71
TVP23C-201ENST00000225576 GZF1Q9H116 711 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 DNAJC18Q9H819 358 aa19.46■□□□□ 0.71
TVP23C-201ENST00000225576 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 V9GY48 417 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-201ENST00000225576 RASSF7Q02833 373 aa19.45■□□□□ 0.7
TVP23C-201ENST00000225576 PKN1Q16512 942 aa19.45■□□□□ 0.7
TVP23C-201ENST00000225576 TATDN1Q6P1N9 297 aa19.45■□□□□ 0.7
TVP23C-201ENST00000225576 LEO1Q8WVC0 666 aaPredicted RBP19.45■□□□□ 0.7
TVP23C-201ENST00000225576 SPATA32Q96LK8 384 aa19.45■□□□□ 0.7
TVP23C-201ENST00000225576 LZTS2Q9BRK4 669 aa19.45■□□□□ 0.7
TVP23C-201ENST00000225576 CNTNAP5Q8WYK1 1306 aa19.45■□□□□ 0.7
TVP23C-201ENST00000225576 PALM3A6NDB9 673 aaPredicted RBP19.44■□□□□ 0.7
TVP23C-201ENST00000225576 XBP1P17861 261 aa19.44■□□□□ 0.7
TVP23C-201ENST00000225576 U2AF2P26368 475 aaKnown RBP eCLIP19.44■□□□□ 0.74e-8■■■□□ 17.6
TVP23C-201ENST00000225576 EIF6P56537 245 aaKnown RBP19.44■□□□□ 0.7
TVP23C-201ENST00000225576 ZNF280AP59817 542 aaPredicted RBP19.44■□□□□ 0.7
TVP23C-201ENST00000225576 FAM151AQ8WW52 585 aa19.44■□□□□ 0.7
TVP23C-201ENST00000225576 TRIM34Q9BYJ4 488 aa19.44■□□□□ 0.7
TVP23C-201ENST00000225576 MAD2L2Q9UI95 211 aa19.44■□□□□ 0.7
TVP23C-201ENST00000225576 RCOR1Q9UKL0 485 aa19.44■□□□□ 0.7
TVP23C-201ENST00000225576 ARFGEF1Q9Y6D6 1849 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 KIF28PB7ZC32 967 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 MYO1BO43795 1136 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 TTLL1O95922 423 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 MMP1P03956 469 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 PRELPP51888 382 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 SAFBQ15424 915 aaKnown RBP eCLIP19.43■□□□□ 0.7
TVP23C-201ENST00000225576 DPF2Q92785 391 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 TCHHQ07283 1943 aa19.43■□□□□ 0.7
TVP23C-201ENST00000225576 CLRN2A0PK11 232 aa19.42■□□□□ 0.7
TVP23C-201ENST00000225576 TCP10L2B9ZVM9 353 aa19.42■□□□□ 0.7
TVP23C-201ENST00000225576 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
TVP23C-201ENST00000225576 MYSM1Q5VVJ2 828 aa19.42■□□□□ 0.7
TVP23C-201ENST00000225576 CAVIN1Q6NZI2 390 aaKnown RBP19.42■□□□□ 0.7
TVP23C-201ENST00000225576 FAM83AQ86UY5 434 aa19.42■□□□□ 0.7
TVP23C-201ENST00000225576 STAG2Q8N3U4 1231 aa19.42■□□□□ 0.7
TVP23C-201ENST00000225576 MYOZ2Q9NPC6 264 aa19.42■□□□□ 0.7
TVP23C-201ENST00000225576 HERC5Q9UII4 1024 aaKnown RBP19.42■□□□□ 0.7
TVP23C-201ENST00000225576 SMARCA1P28370 1054 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms