RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 UBAC1Q9BSL1 405 aa19.7■□□□□ 0.74
USB1-201ENST00000219281 DESI2Q9BSY9 194 aa19.7■□□□□ 0.74
USB1-201ENST00000219281 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
USB1-201ENST00000219281 PLA2G4AP47712 749 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 MAP3K9P80192 1104 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 PPARAQ07869 468 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 DHX58Q96C10 678 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 RNF41Q9H4P4 317 aaPredicted RBP19.69■□□□□ 0.74
USB1-201ENST00000219281 LRP5O75197 1615 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 TPM1P09493 284 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 FNBP4Q8N3X1 1017 aaPredicted RBP19.69■□□□□ 0.74
USB1-201ENST00000219281 SPATA20Q8TB22 786 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 SHISA4Q96DD7 197 aa19.69■□□□□ 0.74
USB1-201ENST00000219281 NOL10Q9BSC4 688 aaKnown RBP19.69■□□□□ 0.74
USB1-201ENST00000219281 CICQ96RK0 1608 aaPredicted RBP19.69■□□□□ 0.74
USB1-201ENST00000219281 A0A087X0B3 334 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 MINDY4BA8MYZ0 360 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 SEC31AO94979 1220 aaKnown RBP19.68■□□□□ 0.74
USB1-201ENST00000219281 ERCC5P28715 1186 aaPredicted RBP19.68■□□□□ 0.74
USB1-201ENST00000219281 AFMP43652 599 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 KARSQ15046 597 aaKnown RBP19.68■□□□□ 0.74
USB1-201ENST00000219281 EPSTI1Q96J88 318 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 VPS54Q9P1Q0 977 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 CHD4Q14839 1912 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 A0A1B0GTH6 734 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 TEX33O43247 280 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 MTF1Q14872 753 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 CCDC152Q4G0S7 254 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 SDR42E1Q8WUS8 393 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 KIFC2Q96AC6 838 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 MTA3Q9BTC8 594 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 MRFAP1Q9Y605 127 aa19.68■□□□□ 0.74
USB1-201ENST00000219281 hCG_1642624A0A1W2PR95 340 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 SMIM22K7EJ46 135 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 CASP1P29466 404 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 STX17P56962 302 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 AKAP17AQ02040 695 aaKnown RBP19.67■□□□□ 0.74
USB1-201ENST00000219281 PPP2R3AQ06190 1150 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 EARS2Q5JPH6 523 aaKnown RBP19.67■□□□□ 0.74
USB1-201ENST00000219281 KLHL10Q6JEL2 608 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 CLEC4GQ6UXB4 293 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 AATFQ9NY61 560 aaKnown RBP eCLIP19.67■□□□□ 0.74
USB1-201ENST00000219281 IQSEC3Q9UPP2 1182 aaPredicted RBP19.67■□□□□ 0.74
USB1-201ENST00000219281 TNKSO95271 1327 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 TRIM75PA6NK02 468 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 AKR1B15C9JRZ8 316 aaPredicted RBP19.67■□□□□ 0.74
USB1-201ENST00000219281 CYP7A1P22680 504 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 RCAN1P53805 252 aa19.67■□□□□ 0.74
USB1-201ENST00000219281 ARAP2Q8WZ64 1704 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 SOWAHDA6NJG2 315 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 PRDM1O75626 825 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 CD44P16070 742 aaKnown RBP19.66■□□□□ 0.74
USB1-201ENST00000219281 SEC23AQ15436 765 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 TEX35Q5T0J7 233 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 ADGRA1Q86SQ6 560 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 RNF26Q9BY78 433 aaPredicted RBP19.66■□□□□ 0.74
USB1-201ENST00000219281 MRPL44Q9H9J2 332 aaKnown RBP19.66■□□□□ 0.74
USB1-201ENST00000219281 DOCK2Q92608 1830 aa19.66■□□□□ 0.74
USB1-201ENST00000219281 PKN1Q16512 942 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 C3orf67Q6ZVT6 689 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 PAGE5Q96GU1 130 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 RTL9Q8NET4 1388 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 XBP1P17861 261 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 KRT2P35908 639 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 SPATA1Q5VX52 437 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 APTXQ7Z2E3 356 aaKnown RBP19.65■□□□□ 0.74
USB1-201ENST00000219281 CPLX3Q8WVH0 158 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 ESR2Q92731 530 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 ZNF652Q9Y2D9 606 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
USB1-201ENST00000219281 COL4A1P02462 1669 aa19.65■□□□□ 0.74
USB1-201ENST00000219281 RBL2Q08999 1139 aa19.64■□□□□ 0.74
USB1-201ENST00000219281 ERFEQ4G0M1 354 aa19.64■□□□□ 0.74
USB1-201ENST00000219281 FAM182BQ5T319 152 aa19.64■□□□□ 0.74
USB1-201ENST00000219281 SYMPKQ92797 1274 aaKnown RBP19.64■□□□□ 0.74
USB1-201ENST00000219281 PANX2Q96RD6 677 aa19.64■□□□□ 0.74
USB1-201ENST00000219281 PHF20Q9BVI0 1012 aa19.64■□□□□ 0.74
USB1-201ENST00000219281 IRX2Q9BZI1 471 aaPredicted RBP19.64■□□□□ 0.74
USB1-201ENST00000219281 SYNRGQ9UMZ2 1314 aa19.64■□□□□ 0.73
USB1-201ENST00000219281 ERICH4A6NGS2 130 aa19.64■□□□□ 0.73
USB1-201ENST00000219281 IGHMBP2P38935 993 aaKnown RBP19.64■□□□□ 0.73
USB1-201ENST00000219281 SMYD4Q8IYR2 804 aaPredicted RBP19.64■□□□□ 0.73
USB1-201ENST00000219281 GPR161Q8N6U8 529 aaKnown RBP19.64■□□□□ 0.73
USB1-201ENST00000219281 IGSF22Q8N9C0 903 aa19.64■□□□□ 0.73
USB1-201ENST00000219281 CCDC12Q8WUD4 166 aaPredicted RBP19.64■□□□□ 0.73
USB1-201ENST00000219281 CCDC34Q96HJ3 373 aa19.64■□□□□ 0.73
USB1-201ENST00000219281 ABCF2Q9UG63 623 aa19.64■□□□□ 0.73
USB1-201ENST00000219281 WNT7AO00755 349 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 CCDC175P0C221 793 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 CHRNDQ07001 517 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 CUL4BQ13620 913 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 RSRC2Q7L4I2 434 aaKnown RBP19.63■□□□□ 0.73
USB1-201ENST00000219281 SH3RF1Q7Z6J0 888 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 PPFIBP1Q86W92 1011 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 LZTFL1Q9NQ48 299 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 V9GY48 417 aaPredicted RBP19.63■□□□□ 0.73
USB1-201ENST00000219281 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 PLEKHA8P1O95397 391 aa19.63■□□□□ 0.73
USB1-201ENST00000219281 CC2D1AQ6P1N0 951 aaPredicted RBP19.63■□□□□ 0.73
USB1-201ENST00000219281 RAD9BQ6WBX8 426 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms