RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 GYG1P46976 350 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 USH1GQ495M9 461 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 IPO4Q8TEX9 1081 aaKnown RBP25.81■■□□□ 1.72
TARBP1-201ENST00000040877 ZMYM6O95789 1325 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 LEMD3Q9Y2U8 911 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 NFE2L3Q9Y4A8 694 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 ME3Q16798 604 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 OTUD6BQ8N6M0 293 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 FANCBQ8NB91 859 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 KDM5CP41229 1560 aa25.8■■□□□ 1.72
TARBP1-201ENST00000040877 BIN2Q9UBW5 565 aaPredicted RBP25.8■■□□□ 1.72
TARBP1-201ENST00000040877 GNA14O95837 355 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 GSPT1P15170 499 aaKnown RBP25.79■■□□□ 1.72
TARBP1-201ENST00000040877 CRKLP46109 303 aaKnown RBP25.79■■□□□ 1.72
TARBP1-201ENST00000040877 MYCT1Q8N699 235 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 NAPGQ99747 312 aaPredicted RBP25.79■■□□□ 1.72
TARBP1-201ENST00000040877 GNPTABQ3T906 1256 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 NOSTRINQ8IVI9 506 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 EDC3Q96F86 508 aaKnown RBP25.79■■□□□ 1.72
TARBP1-201ENST00000040877 ATG3Q9NT62 314 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 MED23Q9ULK4 1368 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 C2CD5Q86YS7 1000 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 BLIDQ8IZY5 108 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 CBX8Q9HC52 389 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 CSADQ9Y600 493 aa25.79■■□□□ 1.72
TARBP1-201ENST00000040877 EXOC3O60645 756 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 BCAMP50895 628 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 CLUL1Q15846 466 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 XDHP47989 1333 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 HECW2Q9P2P5 1572 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 ZNF75DP51815 510 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 OTUD6AQ7L8S5 288 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 GPR161Q8N6U8 529 aaKnown RBP25.78■■□□□ 1.72
TARBP1-201ENST00000040877 ANKS4BQ8N8V4 417 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 ZNF804BA4D1E1 1349 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 UBL4BQ8N7F7 174 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 PNMA1Q8ND90 353 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 RBSNQ9H1K0 784 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 TNKSO95271 1327 aa25.78■■□□□ 1.72
TARBP1-201ENST00000040877 FBF1Q8TES7 1133 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 MRPL11Q9Y3B7 192 aaKnown RBP25.77■■□□□ 1.72
TARBP1-201ENST00000040877 BCRP11274 1271 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 LRRC24Q50LG9 513 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 ARHGAP6O43182 974 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 USPL1Q5W0Q7 1092 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 PAIP2Q9BPZ3 127 aaKnown RBP25.77■■□□□ 1.72
TARBP1-201ENST00000040877 RRAGDQ9NQL2 400 aaPredicted RBP25.77■■□□□ 1.72
TARBP1-201ENST00000040877 MAPK8IP1Q9UQF2 711 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 ZNF408Q9H9D4 720 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 SLC5A4Q9NY91 659 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 ROBO2Q9HCK4 1378 aa25.77■■□□□ 1.72
TARBP1-201ENST00000040877 TRMT2AQ8IZ69 625 aaKnown RBP25.76■■□□□ 1.71
TARBP1-201ENST00000040877 FAM169AQ9Y6X4 670 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 GAS7O60861 476 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 INF2Q27J81 1249 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 ATRIPQ8WXE1 791 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 CCDC114Q96M63 670 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 IFT81Q8WYA0 676 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 MRPL44Q9H9J2 332 aaKnown RBP25.76■■□□□ 1.71
TARBP1-201ENST00000040877 CFAP58Q5T655 872 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 NELFBQ8WX92 580 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 TRIM6Q9C030 488 aaPredicted RBP25.76■■□□□ 1.71
TARBP1-201ENST00000040877 OSBPL3Q9H4L5 887 aa25.76■■□□□ 1.71
TARBP1-201ENST00000040877 GAS8O95995 478 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 GREM2Q9H772 168 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 ACTN4O43707 911 aaKnown RBP25.75■■□□□ 1.71
TARBP1-201ENST00000040877 FLOT1O75955 427 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 FGAP02671 866 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 PTH1RQ03431 593 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 DYMQ7RTS9 669 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 ERO1AQ96HE7 468 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 CCDC17Q96LX7 622 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 ERBB3P21860 1342 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 GCNT3O95395 438 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 ERCC5P28715 1186 aaPredicted RBP25.75■■□□□ 1.71
TARBP1-201ENST00000040877 BTDP43251 543 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 SLFN12Q8IYM2 578 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 KIFC2Q96AC6 838 aa25.75■■□□□ 1.71
TARBP1-201ENST00000040877 PSMD1Q99460 953 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 DDX39AO00148 427 aaKnown RBP25.74■■□□□ 1.71
TARBP1-201ENST00000040877 FAM196AQ6ZSG2 479 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 PSTPIP2Q9H939 334 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 SCG2P13521 617 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 PABPC4Q13310 644 aaKnown RBP eCLIP25.74■■□□□ 1.71
TARBP1-201ENST00000040877 CERKLQ49MI3 558 aaPredicted RBP25.74■■□□□ 1.71
TARBP1-201ENST00000040877 MCF2L2Q86YR7 1114 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 AGTPBP1Q9UPW5 1226 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 KRT9P35527 623 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 MRPS9P82933 396 aaKnown RBP25.74■■□□□ 1.71
TARBP1-201ENST00000040877 CCDC63Q8NA47 563 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 CEP63Q96MT8 703 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 LMBRD1Q9NUN5 540 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 TSKSQ9UJT2 592 aa25.74■■□□□ 1.71
TARBP1-201ENST00000040877 RHOXF2BP0C7M4 288 aa25.73■■□□□ 1.71
TARBP1-201ENST00000040877 ATP5DP30049 168 aa25.73■■□□□ 1.71
TARBP1-201ENST00000040877 SECISBP2LQ93073 1101 aaKnown RBP25.73■■□□□ 1.71
TARBP1-201ENST00000040877 RHOXF2Q9BQY4 288 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms