RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Il7P10168 154 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Golim4Q8BXA1 655 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 MtrrQ8C1A3 696 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Atad2Q8CDM1 1040 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Vps16Q920Q4 839 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Astn2Q80Z10 1352 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Psmd14O35593 310 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Kctd16Q5DTY9 427 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ltv1Q6NSQ7 470 aaKnown RBP8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Usp49Q6P9L4 685 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 B4galnt4Q766D5 1034 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 F13a1Q8BH61 732 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ncaph2Q8BSP2 607 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ano2Q8CFW1 1002 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Aipl1Q924K1 328 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ugt1a8D3Z748 530 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ugt1a10E9PXN7 530 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Pkn1P70268 946 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Anks1bQ8BIZ1 1259 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 RalylQ8BTF8 293 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Ythdf3Q8BYK6 585 aaKnown RBP8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Apol10aQ8CCA5 318 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Bcl11bQ99PV8 884 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Mis18aQ9CZJ6 204 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Klhl10Q9D5V2 608 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 LratQ9JI60 231 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Efcc1Q9JJF6 558 aa8.53□□□□□ -1.04
Bdnf-209ENSMUST00000111050 Prdm2A2A7B5 1709 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Taf4bG5E8Z2 855 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Snx12O70493 165 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Rb1P13405 921 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ctnnd1P30999 938 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Hspd1P63038 573 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cyfip2Q5SQX6 1253 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Brsk2Q69Z98 735 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Rbm17Q8JZX4 405 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ccdc80Q8R2G6 949 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pcdha5Q91Y15 934 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Alg1Q921Q3 482 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Uso1Q9Z1Z0 959 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pafah1b1P63005 410 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Psmd1Q3TXS7 953 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Nr1d1Q3UV55 615 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Esyt3Q5DTI8 891 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ccdc50Q810U5 305 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 AidaQ8C4Q6 305 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Thoc1Q8R3N6 657 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Fam84aQ9D650 292 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Akr1b10G5E895 316 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tmod1P49813 359 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pls1Q3V0K9 630 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Papd7Q6PB75 542 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Zbed4Q80WQ9 1168 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Rasal3Q8C2K5 1041 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ddx47Q9CWX9 455 aaKnown RBP8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sall1Q9ER74 1322 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Parp14Q2EMV9 1817 aa8.52□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gm5814J3QP80 125 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 VimP20152 466 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Grm8P47743 908 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Llgl2Q3TJ91 1027 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pabpc4Q6PHQ9 660 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cep104Q80V31 926 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pde5aQ8CG03 865 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Mfap3Q922T2 349 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Vwa5aQ99KC8 793 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Mrfap1Q9CQL7 125 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Lmbr1lQ9D1E5 489 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Kiaa0232Q80U59 1396 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Akap12Q9WTQ5 1684 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tmprss11aQ3UQ41 389 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ddx3xQ62167 662 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Rps6ka6Q7TPS0 764 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Trim56Q80VI1 734 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tpcn2Q8BWC0 731 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Fam133bQ9CVI2 245 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tmed5Q9CXE7 229 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Itga2bQ9QUM0 1033 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 SsbP32067 415 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gli2Q0VGT2 1544 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Adora1Q60612 326 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gbp4Q61107 620 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Antxr2Q6DFX2 487 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sval3Q76I99 144 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Vps37dQ810I0 261 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 AarsQ8BGQ7 968 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Trpa1Q8BLA8 1125 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cep55Q8BT07 462 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Gpcpd1Q8C0L9 675 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Kcnq3Q8K3F6 873 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Usp33Q8R5K2 909 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 EpgnQ924X1 152 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Abcf2Q99LE6 628 aaKnown RBP8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cfap45Q9D9U9 551 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 ThegQ9JMB1 375 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 AmfrQ9R049 643 aa8.51□□□□□ -1.05
Bdnf-209ENSMUST00000111050 SrprbP47758 269 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Eif4a1P60843 406 aaKnown RBP8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Krit1Q6S5J6 736 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Clec16aQ80U30 1036 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 71.3 ms