RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Btn2a2A4QPC6 514 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ifit1bl2Q3U687 466 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Olfr121Q5CZY0 321 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Hdac4Q6NZM9 1076 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Cdc23Q8BGZ4 597 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Rasal3Q8C2K5 1041 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Efcab8Q8C9R9 203 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Apol10aQ8CCA5 318 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Nod2Q8K3Z0 1020 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Lcmt1A0A0U1RNF2 332 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Bnip3O55003 187 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Adck5Q80V03 582 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gga3Q8BMI3 718 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Slc39a11Q8BWY7 342 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Hgh1Q8C3I8 393 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Trim29Q8R2Q0 587 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 PdclQ9DBX2 301 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 EcsitQ9QZH6 435 aa14.63□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ulk4Q3V129 1303 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Scgb2b18A0A087WPA9 112 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Psmb7P70195 277 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Traf3ip1Q149C2 625 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 MpndQ3TV65 487 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ehmt1Q5DW34 1296 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Mrps31Q61733 384 aaKnown RBP14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Krt40Q6IFX3 439 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tcp11l2Q8K1H7 517 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Arhgef6Q8K4I3 771 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 E2f4Q8R0K9 410 aa14.62□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ube4aE9Q735 1028 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Dynll1P63168 89 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 RragbQ6NTA4 374 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tubb2aQ7TMM9 445 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Sept9Q80UG5 583 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 QarsQ8BML9 775 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tubb2bQ9CWF2 445 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Wdr64Q9D565 1086 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Chaf1aQ9QWF0 911 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Myh13B1AR69 1938 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gm3409A0A0G2JE67 319 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Api5O35841 504 aaKnown RBP14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 MarcksP26645 309 aaKnown RBP14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gjb4Q02738 266 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Nop9Q8BMC4 636 aaKnown RBP14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Triml1Q8BVP1 470 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Txndc5Q91W90 417 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Pcdha12Q91Y18 950 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Rrp1bQ91YK2 724 aaKnown RBP14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Apobec3Q99J72 440 aaKnown RBP14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Sgpp1Q9JI99 430 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Egfl6Q9JJZ5 550 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Abhd2Q9QXM0 425 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Foxo3Q9WVH4 672 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Znf609Q8BZ47 1413 aa14.61□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ecm29Q6PDI5 1840 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Prr29B1ARI9 187 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 GpiP06745 558 aaKnown RBP14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Casp1P29452 402 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 MycbpapQ5SUV2 932 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Adam6bQ6IMH7 756 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tacc1Q6Y685 774 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Dusp9Q7TNL7 452 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 ParvgQ9ERD8 331 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Uso1Q9Z1Z0 959 aaKnown RBP14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Zfand4D3Z3C6 739 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Pak1O88643 545 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 ItpripQ3TNL8 555 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Exoc5Q3TPX4 708 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 CtcfQ61164 736 aaKnown RBP14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ctnna3Q65CL1 895 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Smarca1Q6PGB8 1046 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Fam161bQ8CB59 589 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 MlphQ91V27 590 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Scrn1Q9CZC8 414 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Myo1hQ9D6A1 958 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Copb1Q9JIF7 953 aa14.6□□□□□ -0.07
Nup88-203ENSMUST00000108531 Cyp2c23E9Q5K4 494 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tuft1O08970 390 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Trap1aP19473 224 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Cdr2P97817 455 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Trappc10Q3TLI0 1259 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Tmtc2Q56A06 836 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Cep112Q5PR68 954 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Rbm15bQ6PHZ5 887 aaKnown RBP14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Atp1a2Q6PIE5 1020 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Snd1Q78PY7 910 aaKnown RBP14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Map3k11Q80XI6 850 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Dact1Q8R4A3 778 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ginm1Q91WR6 327 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Uap1Q91YN5 522 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 NgdnQ9DB96 315 aaKnown RBP14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Irs4Q9Z0Y7 1216 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Aox3G3X982 1335 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 A0A1W2P6Q8 802 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gm9048A0A1W2P7H4 802 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 A0A1W2P7S8 802 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 A0A1W2P7Z8 802 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Gm9046A0A1W2P855 802 aa14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Ctr9Q62018 1173 aaKnown RBP14.59□□□□□ -0.07
Nup88-203ENSMUST00000108531 Cdc5lQ6A068 802 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms